Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_3477 |
Symbol | |
ID | 3905211 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 4146398 |
End bp | 4147135 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637880799 |
Product | protein tyrosine/serine phosphatase |
Protein accession | YP_482559 |
Protein GI | 86742159 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2365] Protein tyrosine/serine phosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGGGTT GCGACAACGC GCGAGATCTG GGTGGGCTGC CCACCCTGGA CGGTGCAACC ACCCGATGGG GGGTATTCCT GCGCACCGAC TCCGTCCAGG CCCTGACAGA CGGTGACGTG CTCACGCTGC GGGAGACATT CGGGCTACGC ATGGTCATCG ACCTACGGGC CAAGGAGGAG GCGGAGCGGG AGGGCCGCGG GCCGCTCGCC TACGAACCGG TCACTTACCA CAATCTGTCC TTTCTCCCCG GTGAATGGGT GATGCCGGAC GATCCGCGCT ACCCTGCCAT CGTCAAGGAC CGCGACTCAG CCGACCGGAT CGAGCACTAC CTGGACTACC TGCGCCTGGC CGGGGACTCG GTGGCCAGGG CGCTGCGCCT GCTGGCCCAG CCGACGGCGG GCCCGGCCCT GTTCCACTGC GCGGCGGGAA AGGACCGTAC CGGCGTGCTC GCGGCCCTGC TCCTCAGTCT CGTCGGCGTG CACCCCGAGG CGATCGTCGC CGACTACGTC CAGACGAACG AGCGCATCGA CCGGGTCAAC GCCCGCCTGG CCGACCGACC GTCCTATAAC CACTCGGTGA CCTTGCTCAC CTCGGGCCAC CTGGCTTGCC GGCCCGAGGT CATGCGGGGC TTCCTGGCCG GTGTCGACGC CGGTTGGGGC GGTCCCGCGG CCTGGGCTCG GCACGCCGGT CTCACCGAGA CCGACCTGCG GTCACTGCGC ACGGCCCTGG TTGGATAG
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Protein sequence | MSGCDNARDL GGLPTLDGAT TRWGVFLRTD SVQALTDGDV LTLRETFGLR MVIDLRAKEE AEREGRGPLA YEPVTYHNLS FLPGEWVMPD DPRYPAIVKD RDSADRIEHY LDYLRLAGDS VARALRLLAQ PTAGPALFHC AAGKDRTGVL AALLLSLVGV HPEAIVADYV QTNERIDRVN ARLADRPSYN HSVTLLTSGH LACRPEVMRG FLAGVDAGWG GPAAWARHAG LTETDLRSLR TALVG
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