Gene Francci3_3477 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3477 
Symbol 
ID3905211 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp4146398 
End bp4147135 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content70% 
IMG OID637880799 
Productprotein tyrosine/serine phosphatase 
Protein accessionYP_482559 
Protein GI86742159 
COG category[T] Signal transduction mechanisms 
COG ID[COG2365] Protein tyrosine/serine phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGGTT GCGACAACGC GCGAGATCTG GGTGGGCTGC CCACCCTGGA CGGTGCAACC 
ACCCGATGGG GGGTATTCCT GCGCACCGAC TCCGTCCAGG CCCTGACAGA CGGTGACGTG
CTCACGCTGC GGGAGACATT CGGGCTACGC ATGGTCATCG ACCTACGGGC CAAGGAGGAG
GCGGAGCGGG AGGGCCGCGG GCCGCTCGCC TACGAACCGG TCACTTACCA CAATCTGTCC
TTTCTCCCCG GTGAATGGGT GATGCCGGAC GATCCGCGCT ACCCTGCCAT CGTCAAGGAC
CGCGACTCAG CCGACCGGAT CGAGCACTAC CTGGACTACC TGCGCCTGGC CGGGGACTCG
GTGGCCAGGG CGCTGCGCCT GCTGGCCCAG CCGACGGCGG GCCCGGCCCT GTTCCACTGC
GCGGCGGGAA AGGACCGTAC CGGCGTGCTC GCGGCCCTGC TCCTCAGTCT CGTCGGCGTG
CACCCCGAGG CGATCGTCGC CGACTACGTC CAGACGAACG AGCGCATCGA CCGGGTCAAC
GCCCGCCTGG CCGACCGACC GTCCTATAAC CACTCGGTGA CCTTGCTCAC CTCGGGCCAC
CTGGCTTGCC GGCCCGAGGT CATGCGGGGC TTCCTGGCCG GTGTCGACGC CGGTTGGGGC
GGTCCCGCGG CCTGGGCTCG GCACGCCGGT CTCACCGAGA CCGACCTGCG GTCACTGCGC
ACGGCCCTGG TTGGATAG
 
Protein sequence
MSGCDNARDL GGLPTLDGAT TRWGVFLRTD SVQALTDGDV LTLRETFGLR MVIDLRAKEE 
AEREGRGPLA YEPVTYHNLS FLPGEWVMPD DPRYPAIVKD RDSADRIEHY LDYLRLAGDS
VARALRLLAQ PTAGPALFHC AAGKDRTGVL AALLLSLVGV HPEAIVADYV QTNERIDRVN
ARLADRPSYN HSVTLLTSGH LACRPEVMRG FLAGVDAGWG GPAAWARHAG LTETDLRSLR
TALVG