Gene Francci3_3462 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3462 
Symbol 
ID3905702 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp4127184 
End bp4128281 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content75% 
IMG OID637880785 
Productamidohydrolase 3 
Protein accessionYP_482545 
Protein GI86742145 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1228] Imidazolonepropionase and related amidohydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGTGC CGGCGCTGCG GATCCGTGGC GGCGTGCTGG TCAGTCCGAC GGAGGTCCGT 
GACGAGGTCT GGGTCGTCGA TGGCCGGATC ACCTTCTCCG CCCCCACCGG CCCGGCGGCC
CGGGACGTAC GGACGGTCTC CGGATGGGTG TTGCCCGGCC TCGTCGACGC TCACTGCCAT
GTCGGCCTCG CCGCGCACGG CGCCGTCGAC AGGCCCACCG CCGAGCAGCA GATCATCACC
GACCGGGCGG CGGGCGCGCT GCTGCTGCGC GACGCCGGTT CCCCGGCCGA CACCCGGTGG
ATCGATGCCC GTGACGACCT GCCCCGGCTG GTGCGGGCCG GCCGGCACAT CGCCCGGCCC
CGGCGATACC TCCGCAACTA CGCGGCGGAG GTCGAGCCGG CCGACCTCGT CGCCGAGGTC
CTCGCGCAGG CCGGCCGGGG CGACGGGTGG GTGAAGCTCG TCGGCGACTG GATCGACCGC
GGGCTGGGCG ACCTGGCGCC GTGCTGGCCC GCGGACGTGG CGAAGGCCGC GATCGACGCG
GCGCACGCCG CCGGAGCCCG GGTCACCGCC CACTGCTTCG CCGAGGACTC CCTCGCGGAT
CTGGTCGAGG CAGGGATCGA CTGCATCGAG CACGCCACCG GTCTCACCGA GCGCACGATC
CCGCTGTTCG CCGAGCGGGG GGTCGCCATC GTGCCAACCC TGGTGAACAT CGCGACCTTC
GAGGACATCG CCGCGGGCGC CGAGGCGAAG TTCCCCGCCT ACGCCCGGCA CATGCGTGCC
CTGTACGCCC GGCGCCATGA CACGGTGCGG GCGGCCTACG ACGCCGGCAT CCCGATCTTC
GTCGGTACCG ACGCCGGGGG AAGCCTCCCG CACGGGCTGG TCGCCGCCGA GGTGGCCGAG
CTTCGCCTGG CCGGGCTGCC GGCGGCGGCC GCGCTCGACG CGGCGACCTG GGGGGCCCGC
TCCTGGCTCG GTTATCCGGG CCTGTCCGAG GGCGCCTGGG CCGATCTGGT GGTGTATCCG
AGCGACCCGC GGGCCGACGT CGCGGTGCTC GGCGCCCCGG ACCTCATCGT TCTGCGCGGA
CGGCCGGTCT CTGCCTGA
 
Protein sequence
MNVPALRIRG GVLVSPTEVR DEVWVVDGRI TFSAPTGPAA RDVRTVSGWV LPGLVDAHCH 
VGLAAHGAVD RPTAEQQIIT DRAAGALLLR DAGSPADTRW IDARDDLPRL VRAGRHIARP
RRYLRNYAAE VEPADLVAEV LAQAGRGDGW VKLVGDWIDR GLGDLAPCWP ADVAKAAIDA
AHAAGARVTA HCFAEDSLAD LVEAGIDCIE HATGLTERTI PLFAERGVAI VPTLVNIATF
EDIAAGAEAK FPAYARHMRA LYARRHDTVR AAYDAGIPIF VGTDAGGSLP HGLVAAEVAE
LRLAGLPAAA ALDAATWGAR SWLGYPGLSE GAWADLVVYP SDPRADVAVL GAPDLIVLRG
RPVSA