Gene Francci3_3388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3388 
Symbol 
ID3905970 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp4016455 
End bp4017981 
Gene Length1527 bp 
Protein Length508 aa 
Translation table11 
GC content67% 
IMG OID637880710 
Productphage integrase 
Protein accessionYP_482471 
Protein GI86742071 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.328241 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTCAAAC GGTGCGGCTG CCGCGATCCC CAGACAGGCA AGGATTACGG CGCCCGGTGT 
CCGAAACTGC CCCGGTCGGA CCACGGTTCC TGGTTGTACA TACACGACGT CCCACCCGGT
CCCAATGGGC GGCGGCGGCG CACCACCGGC GGACCGTTCG AGACCGAGAC GGAGGCCGAG
GTCGCGTTGA CCGGTTCCCT GGCCGAACTC CATGGCGGTG GGCGGCCCGA CGACACCGGG
CTCACCGTCG CCCGCTACCT CGACGACTGG CTCGATGGAA AGGCGAGTCT CGCCGCGTCC
ACCCGCCGCT CGTATGAGGA GCACGTCCGC CTCTATCTCA AACCCGGCCT GGGACACCTC
AGACTCGCTG ACCTGCGCGA CCACCACATC GAACAGCTCT ACGCCGCCAT GCGGCTCATC
GGCCGGGATC TGCACGGCAG GAAACGCTCA CCCCTGCTCG TCCGCCTCCT CGAAGTCCGC
AAAGACGACC CCAACCACCG CCGGCCCCTC AGCGCCTCCC GGCTACGCCG GGTGCACGCC
ACCACCATGA GCGCGCTCAA CAGCGCCGTG AAACGTAAGA AACTTGGCGT CAATCCGGCC
GAACACGTCG AACTACCCAA GGCCCGCAAG CCCCGACCGC TCGTCTGGAC CGCACCGCGG
ATCGCCGCCT GGGAACGCAC CGGTAAACGG CCCTCCCCCG TCATGGTCTG GACCCCGCAG
CAGGCCGGTG CCTTCCTCGA CTTCACCGTC GCCGACCGCC TTTACCCACT GTGGCATCTC
ATCGCCCACC GCGCCCTACG TCGCGGTGAA GCCGTCGCCC TCGGCTGGAC CGAAATCGAC
ATCGACGACG ACAGTATCTA CATCCTCGAC AACCTCCCCG GATCCGTTTC CGGCGCCGAC
GACAACCTCG ACCTGGACGG CGACGAATAC ACCGAACCCA AAAGCGACGC CGGCTACCGT
ACTGTCAGCC TGGACCCGGC TACAAAAAAC GTCCTCACCA CCTGGCAGGC GCGCCAAGAC
GAGGAACGCG CCGCTTACGG TAAGGCCTGG GTCGACAGCG GACGGATGTT CACTCATCCC
GATGGCAGCA GGCTCACCCC CAACGGCGTC TCGCAACGCT TCGAACGGCT CATCACCCGA
TTCGCCACCA TCCGCCATGA GCACGCCGAA CACAGCTGGA CCGTCGACCA GCTCGCCGCC
CGGCATTTCA TGCCCGAAGA CGCCATTCAG ACCGCGCTCG CCTTCGGCCC CCTGCCCCCG
ATCCGACTGC ACGACCTGAG GCACACCGCC GCCAGCCTCA CCTACCGGGC CACCAAGGAC
CTCAAGGTCG TCTCCGAACT CCTCGGACAC TCCTCCGTCC ACTTCACCGG CGACGTCTAC
ACCTCGGTCT TCGCCGACGC GGATCGCGCC GCGGCCAAAG CCGCCGCCGA CATCGTCCCC
CGCCGACACC CACCCGGCCA GGTGGAACCC GACAGCTTGG ACGACCCCAC ACCACCCCCC
GCCAACGGAC CTGGCCTCGA CCTGTAG
 
Protein sequence
MFKRCGCRDP QTGKDYGARC PKLPRSDHGS WLYIHDVPPG PNGRRRRTTG GPFETETEAE 
VALTGSLAEL HGGGRPDDTG LTVARYLDDW LDGKASLAAS TRRSYEEHVR LYLKPGLGHL
RLADLRDHHI EQLYAAMRLI GRDLHGRKRS PLLVRLLEVR KDDPNHRRPL SASRLRRVHA
TTMSALNSAV KRKKLGVNPA EHVELPKARK PRPLVWTAPR IAAWERTGKR PSPVMVWTPQ
QAGAFLDFTV ADRLYPLWHL IAHRALRRGE AVALGWTEID IDDDSIYILD NLPGSVSGAD
DNLDLDGDEY TEPKSDAGYR TVSLDPATKN VLTTWQARQD EERAAYGKAW VDSGRMFTHP
DGSRLTPNGV SQRFERLITR FATIRHEHAE HSWTVDQLAA RHFMPEDAIQ TALAFGPLPP
IRLHDLRHTA ASLTYRATKD LKVVSELLGH SSVHFTGDVY TSVFADADRA AAKAAADIVP
RRHPPGQVEP DSLDDPTPPP ANGPGLDL