| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3385 |
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| Symbol | |
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| ID | 3905967 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 4014056 |
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| End bp | 4014982 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637880707 |
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| Product | transposase, IS4 |
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| Protein accession | YP_482468 |
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| Protein GI | 86742068 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3293] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.300712 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCTTCC GGGGTGCGCG ATGGGGGTGC ACTCGTCGGA TCATGGCCGG GTGGGGGTGG
CTGGGGGCTG ACGGTGGACG GATGGCGCAT GCTCACCGTC ATCGGTATCC GTCGGATCTG
TCGGACTCGC AGTGGGCTCT GGTCGGGCCG TTGCTCCCGC CGCCGGCGGC GGTGTGCCGG
CCGGAGAAGC ATGATCGGCG TGATCTGGTG GACGCGATCC TGTATGTGGT GCGCTCGGGG
TGTGCGTGGC GGGCGTTGCC GTCGGACTAT CCGCCGTGGC AGACCGTGTA CTACTACTTC
GCCCTCTGGC ACGATCTGGG TGTCACCGAA CGTGTTCACG ACGTGCTGCG GGAGCAGGCC
CGCCGGGCGG AAGGACGCGA TGTCGAACCG TCGGCGGGGA TCATCGATTC CCAGTCGGTG
AAGGGCGCCG ACACCGTGCC CGCCTCCTCC CGCGGCTACG ACGCCGGCAA GAAGGTCAAC
GGTCGTAAGC GGTTCATCGC TGTGGACACG ATGGGACTGC TGCTGGCCGT GCTCGTGGTC
CCGGCCAGCA CCCATGACAC CGCCAGTGGC CGGCAGCTCC TCCTCGACAG TTTCTTCGCC
GGCCGGCGGC TACGGCTCGT ATTCGCCGAC GCCGGGTTCG CGGGTGTCTT CATGGACTGG
GCCGCCCGGA TCCTGACCCT CACCCTGCAG GTGGTGCGCA AACCCGCCGG GCAGAAGGGC
TTCTCCGTCC TGCCACGTCG CTGGGTCGTC GAACGAACGT GGTCGTGGAT CACCGGCTAC
CGCCGGCACG CCCGCGACTA CGAACGCCGC CCCGACCACG CCGAATCCCT CATCCGCTGG
GCCATGATCG CCACCATGGT CCGCCGCATC GACCGGCGCA CCCCCGCCCA GCGGCCCGGA
CCCCGACCGC TACAGAGAAT CATCTAA
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| Protein sequence | MIFRGARWGC TRRIMAGWGW LGADGGRMAH AHRHRYPSDL SDSQWALVGP LLPPPAAVCR
PEKHDRRDLV DAILYVVRSG CAWRALPSDY PPWQTVYYYF ALWHDLGVTE RVHDVLREQA
RRAEGRDVEP SAGIIDSQSV KGADTVPASS RGYDAGKKVN GRKRFIAVDT MGLLLAVLVV
PASTHDTASG RQLLLDSFFA GRRLRLVFAD AGFAGVFMDW AARILTLTLQ VVRKPAGQKG
FSVLPRRWVV ERTWSWITGY RRHARDYERR PDHAESLIRW AMIATMVRRI DRRTPAQRPG
PRPLQRII
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