Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_3380 |
Symbol | |
ID | 3905962 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 4010461 |
End bp | 4011099 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637880703 |
Product | hypothetical protein |
Protein accession | YP_482464 |
Protein GI | 86742064 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0602] Organic radical activating enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.186456 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTTATC GGATCAAGGA GATCTTCTAC ACGCTGCAGG GGGAGGGCGT GCGGTCCGGC CGCCCGGCGG TGTTCTGCCG GTTCGCCCTG TGCAACCTGT GGACCGGGCG GGAACGCGAC CGTCACCGGG CGGTGTGCCA GTTCTGCGAC ACCGACTTCG TGGGTACCGA CGGCCCCGAC GGCGGCGTGT TCGACACCCC GGACGACCTG GCCGACGCCG TGGCCGCGCG GTGGCCGTCC GATGCCCCCG GGGCACTGCC CTACGTGGTC TGCACCGGCG GTGAGCCGTT GTTGCAGCTC GACACCCCGG CCGTGTCCGC CCTGCACACA CGAGGTTTCG AAGTGGCCGT CGAGACCAAC GGCACCTGCC CGGCGCCGGC CGGGCTGGAC TGGGTGTGCG TGTCCCCCAA GGCGGGGGCG CCGCTGCGGC TGACCACCGG TGACGAGCTG AAACTGGTCT TCCCGCAGCC CGGCGCCGGA CCGGAGCTGT TCGCCGGCCT GGAGTTCGGC CATCACCTGC TGCAGCCGAT GGACGGGCCG CACCGGGAGG CCAACACCCG GGCGGCGCTC GACTACTGCC TGGCCCACCC ACGCTGGAGG CTCAGCATTC AGACCCACAA GATCCTGGGG ATCCGCTGA
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Protein sequence | MVYRIKEIFY TLQGEGVRSG RPAVFCRFAL CNLWTGRERD RHRAVCQFCD TDFVGTDGPD GGVFDTPDDL ADAVAARWPS DAPGALPYVV CTGGEPLLQL DTPAVSALHT RGFEVAVETN GTCPAPAGLD WVCVSPKAGA PLRLTTGDEL KLVFPQPGAG PELFAGLEFG HHLLQPMDGP HREANTRAAL DYCLAHPRWR LSIQTHKILG IR
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