Gene Francci3_3380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3380 
Symbol 
ID3905962 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp4010461 
End bp4011099 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content71% 
IMG OID637880703 
Producthypothetical protein 
Protein accessionYP_482464 
Protein GI86742064 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0602] Organic radical activating enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.186456 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTTATC GGATCAAGGA GATCTTCTAC ACGCTGCAGG GGGAGGGCGT GCGGTCCGGC 
CGCCCGGCGG TGTTCTGCCG GTTCGCCCTG TGCAACCTGT GGACCGGGCG GGAACGCGAC
CGTCACCGGG CGGTGTGCCA GTTCTGCGAC ACCGACTTCG TGGGTACCGA CGGCCCCGAC
GGCGGCGTGT TCGACACCCC GGACGACCTG GCCGACGCCG TGGCCGCGCG GTGGCCGTCC
GATGCCCCCG GGGCACTGCC CTACGTGGTC TGCACCGGCG GTGAGCCGTT GTTGCAGCTC
GACACCCCGG CCGTGTCCGC CCTGCACACA CGAGGTTTCG AAGTGGCCGT CGAGACCAAC
GGCACCTGCC CGGCGCCGGC CGGGCTGGAC TGGGTGTGCG TGTCCCCCAA GGCGGGGGCG
CCGCTGCGGC TGACCACCGG TGACGAGCTG AAACTGGTCT TCCCGCAGCC CGGCGCCGGA
CCGGAGCTGT TCGCCGGCCT GGAGTTCGGC CATCACCTGC TGCAGCCGAT GGACGGGCCG
CACCGGGAGG CCAACACCCG GGCGGCGCTC GACTACTGCC TGGCCCACCC ACGCTGGAGG
CTCAGCATTC AGACCCACAA GATCCTGGGG ATCCGCTGA
 
Protein sequence
MVYRIKEIFY TLQGEGVRSG RPAVFCRFAL CNLWTGRERD RHRAVCQFCD TDFVGTDGPD 
GGVFDTPDDL ADAVAARWPS DAPGALPYVV CTGGEPLLQL DTPAVSALHT RGFEVAVETN
GTCPAPAGLD WVCVSPKAGA PLRLTTGDEL KLVFPQPGAG PELFAGLEFG HHLLQPMDGP
HREANTRAAL DYCLAHPRWR LSIQTHKILG IR