Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_3379 |
Symbol | |
ID | 3905961 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 4009749 |
End bp | 4010459 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637880702 |
Product | ExsB |
Protein accession | YP_482463 |
Protein GI | 86742063 |
COG category | [R] General function prediction only |
COG ID | [COG0603] Predicted PP-loop superfamily ATPase |
TIGRFAM ID | [TIGR00364] exsB protein |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.108829 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACCCGA CCCGGGGCGC GGTCGGAGGG ACGGACCCCC GACCCGCCGC GGTGGTGCTG TTGAGCGGGG GGCTGGACTC GGCAACCGTG CTCGCCATCG CCAACCAGCA GGGATTCGCC TGCCACGCGT TGAGCTTCCG CTACGGCCAG CGGCACGAGG TCGAACTCGC CGCGGCCCGG CGGGTGGCCT CCGCGCTCGG GGTGGTCCGG CATGTGGTGG TCGACATCGA CCTGGGGGTC TTCGGCGGGT CGGCGCTGAC CGACCCGACC ATCGCCGTCC CGGCGGCCGG AACGGCGGAG GAGATCCCGG TCACCTATGT CCCGGCCCGG AACACGATCT TCCTGTCCTT CGGGCTGGCC CTGGCCGAGA CCGCGGGTGC CTGGGACGTG TTCATCGGCG CGAGTTCGGT CGACTACAGC GGCTACCCGG ACTGCCGTCC CGAGTACCTG GCCGCCTACC AGGCGATGGC CAACCTGGCG ACGAAGGCCA CCGTGTCGGG TGAGCGCACC CTGTCGGTCC ATGCCCCGCT GATGCACCTG AGCAAGGCGG ACACGATTCG CCTTGGTCTC TCGCTCGGGG TTGACTACGG GCTGACGCAC AGCTGCTACG ACCCGGGGCC GGACGGCCGG CCCTGTGGGC GGTGCGACTC CTGCTCGCTG CGGGAGCGTG GTTTCACCGA GGTGGGAGTC CCTGACCCGG CGGGGGGCTG A
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Protein sequence | MNPTRGAVGG TDPRPAAVVL LSGGLDSATV LAIANQQGFA CHALSFRYGQ RHEVELAAAR RVASALGVVR HVVVDIDLGV FGGSALTDPT IAVPAAGTAE EIPVTYVPAR NTIFLSFGLA LAETAGAWDV FIGASSVDYS GYPDCRPEYL AAYQAMANLA TKATVSGERT LSVHAPLMHL SKADTIRLGL SLGVDYGLTH SCYDPGPDGR PCGRCDSCSL RERGFTEVGV PDPAGG
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