Gene Francci3_3379 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3379 
Symbol 
ID3905961 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp4009749 
End bp4010459 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content72% 
IMG OID637880702 
ProductExsB 
Protein accessionYP_482463 
Protein GI86742063 
COG category[R] General function prediction only 
COG ID[COG0603] Predicted PP-loop superfamily ATPase 
TIGRFAM ID[TIGR00364] exsB protein 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.108829 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACCCGA CCCGGGGCGC GGTCGGAGGG ACGGACCCCC GACCCGCCGC GGTGGTGCTG 
TTGAGCGGGG GGCTGGACTC GGCAACCGTG CTCGCCATCG CCAACCAGCA GGGATTCGCC
TGCCACGCGT TGAGCTTCCG CTACGGCCAG CGGCACGAGG TCGAACTCGC CGCGGCCCGG
CGGGTGGCCT CCGCGCTCGG GGTGGTCCGG CATGTGGTGG TCGACATCGA CCTGGGGGTC
TTCGGCGGGT CGGCGCTGAC CGACCCGACC ATCGCCGTCC CGGCGGCCGG AACGGCGGAG
GAGATCCCGG TCACCTATGT CCCGGCCCGG AACACGATCT TCCTGTCCTT CGGGCTGGCC
CTGGCCGAGA CCGCGGGTGC CTGGGACGTG TTCATCGGCG CGAGTTCGGT CGACTACAGC
GGCTACCCGG ACTGCCGTCC CGAGTACCTG GCCGCCTACC AGGCGATGGC CAACCTGGCG
ACGAAGGCCA CCGTGTCGGG TGAGCGCACC CTGTCGGTCC ATGCCCCGCT GATGCACCTG
AGCAAGGCGG ACACGATTCG CCTTGGTCTC TCGCTCGGGG TTGACTACGG GCTGACGCAC
AGCTGCTACG ACCCGGGGCC GGACGGCCGG CCCTGTGGGC GGTGCGACTC CTGCTCGCTG
CGGGAGCGTG GTTTCACCGA GGTGGGAGTC CCTGACCCGG CGGGGGGCTG A
 
Protein sequence
MNPTRGAVGG TDPRPAAVVL LSGGLDSATV LAIANQQGFA CHALSFRYGQ RHEVELAAAR 
RVASALGVVR HVVVDIDLGV FGGSALTDPT IAVPAAGTAE EIPVTYVPAR NTIFLSFGLA
LAETAGAWDV FIGASSVDYS GYPDCRPEYL AAYQAMANLA TKATVSGERT LSVHAPLMHL
SKADTIRLGL SLGVDYGLTH SCYDPGPDGR PCGRCDSCSL RERGFTEVGV PDPAGG