| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3344 |
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| Symbol | |
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| ID | 3904130 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 3968225 |
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| End bp | 3969112 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637880669 |
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| Product | CRISPR-associated Csh2 family protein |
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| Protein accession | YP_482430 |
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| Protein GI | 86742030 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3649] Uncharacterized protein predicted to be involved in DNA repair |
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| TIGRFAM ID | [TIGR01595] CRISPR-associated protein, CT1132 family
[TIGR02589] CRISPR-associated protein, Csd2 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00748339 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.380655 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCTTCA ACCTTGATCC CGAGAAGAAG CACGACATGG TGCTGCTGTT CGACGTCACC
GACGGCAACC CCAACGGTGA CCCGGACAAC GGAAACCGGC CCCGCACCGA CGACGAAACC
GGCCATGGCC TGGTCACCGA CGTCGCGATC AAGAGGAAGG TCCGCGACAC CATCGGCCTG
GCCGCCGAAG CCGAAGGCCT CGACCTGACC CGCTACCAGA TCTTCGTCGA AGCCGGCCAC
GCGCTGAACA CCCGACTGGA AGAGTCCTAC CTCGTCAAGG GACTCGAACT CGGCAAGAAG
ATCGACGATG CGAAAGCCGC GAAGGCCCGG GAATGGCTCG CCAACCGGTA CGTCGACATC
CGCCTGTTCG GCGCGGTCCT GTCCACCGGC AAGACCCAGT CGCTGGGGCA GATCCGCGGA
CCGATCCAGG TCGGCATGGC CCGGTCCCTC GACCCGGTCC TGCCCGTCGA CCATGCGATC
ACCCGGGTCA CCCAGACCAC CCAGGCCGAC ATCGACAAGG GCGAACGCAC CGAGATGGGC
GGCAAGTGGA CCGTCCCCTA CGGCCTGTAC CGGGCAGAGA TCCACTACTC GGCGCCCCGA
GGCCGCCAGA CCGGTGTCAG CGCCGCCGAC CTCGACCTGT TCCTGTGCAC CCTGGTCAAC
ATGTTCGACC ACGACCGGTC CGCGACCCGC GGCGAGATGG CCACCCGTGG CCTGTACGTG
TTCAGCCACC ACAACGCCTT CGGCGTCGCA CCGGCCCACA CCCTCTCCGC CCGCATCACC
GCCCGGAAGA TCTCCGCGGG TGAACCGCGC AGCTTCGGCG ATTACAAGAT CGACGTCGAT
GACGCCGACC TGCCCGACGA CGTGGCCCTC ACCCGCGTGC TGGGATGA
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| Protein sequence | MAFNLDPEKK HDMVLLFDVT DGNPNGDPDN GNRPRTDDET GHGLVTDVAI KRKVRDTIGL
AAEAEGLDLT RYQIFVEAGH ALNTRLEESY LVKGLELGKK IDDAKAAKAR EWLANRYVDI
RLFGAVLSTG KTQSLGQIRG PIQVGMARSL DPVLPVDHAI TRVTQTTQAD IDKGERTEMG
GKWTVPYGLY RAEIHYSAPR GRQTGVSAAD LDLFLCTLVN MFDHDRSATR GEMATRGLYV
FSHHNAFGVA PAHTLSARIT ARKISAGEPR SFGDYKIDVD DADLPDDVAL TRVLG
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