Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_3251 |
Symbol | |
ID | 3904422 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 3848815 |
End bp | 3850593 |
Gene Length | 1779 bp |
Protein Length | 592 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637880576 |
Product | putative signal transduction histidine kinase |
Protein accession | YP_482337 |
Protein GI | 86741937 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4585] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.956838 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAACTG GGTCCGCAGC CAGCCAGAAG CGGGCGGGAA CGGACCCTTC GTCGGTCTCT TCGTCGGTCT CTTCGACGGG CTCACCGACG AGCGAGAACC TGACTTTCCC GCTCGTCGCG CGGCTCGAAC TCGATGAACT GCTGACGCAG CTGGTTGACC GGGCCCAGGA TGTGCTGGCC ACGCAGAGCC GGTTGCGCGG GCTGCTGGCG GCGAGTCGGG CCATCGCCAC GGACCTGCGG CTGCCGGTGC TGCTCAGGCA CATCGTGGAG GCGGCGTGCG AGCTGCTGGA CGTCCGGTAC GGGGCGCTGG GCGTCGTCGC GCCGGACCGC ACCCTGGAGG AGTTCGTCCA CGCCGGCATG GACCCGCGGG ACGTCGACCG AATCGGTCAT CTGCCCACCG GCCACGGGGT GCTCGGTCTA CTGATCGATG ATCCTCGGCC GCGTCGCCTC GACGACATCT CCCGTGACCC GAGTGCGTAT GGCTTCCCCC CCGGCCATCC GCCGATGAGG ACCTTCCTCG GCGTACCTAT CACCGTGCGC GGCGAGGTGT TCGGCAACCT CTATCTGACC GAGAAACGCG GCGGCACGGC CTTTACCGCC GAGGACGAGG AACTCGCGCT CGCCTTGGCC GCCAGCGCCG GTGTCGCGAT CGAGAACGCC CGGCTGTTCC ACGACACCCA GCAGCGGCAC CGGTGGATGA GCGCGTCCGC CGACGTGACC CGCCAGATCA TGGCCGATGC CGACGGCGCC CTCGAGTCTG TTGCGGAACG CGTCCGCACG GTCGCCGACG CGGAGTTCGT CTCCATCGTC CTGCGCGACG AGGAGGCCGG CAGCGCGCGG GTCGCCGTCG CCGTCACCGT CGGAGCGGAC ACCGTTTCCG GCGCCGGTCA GCGGATACCT CTCGACGGCA CCCTCACCGG TCGGGTGATG GCCGAGCAGC AGCCGTTGCG CGTGGAGGAC GCGCAGCTTG ACGCCCTCCC CGAGGAACGG GACGCCGCCA CCGGCCCCCT GATCGTCCTC CCGATGGTCG CCGGCACCGA CCACGTGTCC GGAGTGCTGC TTGTCGGTCG AAACCGGGGG AAGCGTCCCT TCAGCGACAC CGATCTCGCC AGTGCCGCGA GCTTCGCGGG CAACGTCGCG ATCACTCTGG AACTGGCGCG GGTCAAGGCC GACCGGGAGC GGTTGGTGGT CCTGGCCGAC CGTGGTCGCA TCGCCCGTGA CCTGCATGAC CACGTCATCC AGCGGATGTT CGCCGTTGCG CTCGGCTTGC AGGACATCGC CCAGTACGAA CGTCCATCGA ACGCCGAGCG CATCAACCAG TACGTCGAGG ACCTTGACGT TACGATCAAG GACATTCGGC GGTCGATCTT CGAGCTGCGT GCCAGCGGCG CGTCCAAGCG AAGCCGACTG CACGCCGCGA TCGACCGGAT CGCCGAGGAC GTGCGTCCGG CCCTCGGCTT CACGCCGACC GTCCGCTACT CCGGACCGCT CGAAACCGTG ATCGGTGACG ATCTCGCCGA CCAGGTGATC GCTGTCGCCC GGGAGTCGTT GACCAATGCG GCGCGGCATT CGCAGGCCGG GACCGTCGAG CTCCGTATCG GCGTGGCCGG CGAGTCGGTG GTCGTCGACG TGATCGACGA CGGTGTCGGC ATAGGTCCCG GCGGCCGGCG CAGCGGGTTG GACAACCTCC GGACCCGGGC CGAGCAGCTC GGCGGATCTT TCACCCTCAC CACACCGGCA GGCGGGGGCA CCCACCTGCA CTGGGCCGCG CCCCTGTGA
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Protein sequence | METGSAASQK RAGTDPSSVS SSVSSTGSPT SENLTFPLVA RLELDELLTQ LVDRAQDVLA TQSRLRGLLA ASRAIATDLR LPVLLRHIVE AACELLDVRY GALGVVAPDR TLEEFVHAGM DPRDVDRIGH LPTGHGVLGL LIDDPRPRRL DDISRDPSAY GFPPGHPPMR TFLGVPITVR GEVFGNLYLT EKRGGTAFTA EDEELALALA ASAGVAIENA RLFHDTQQRH RWMSASADVT RQIMADADGA LESVAERVRT VADAEFVSIV LRDEEAGSAR VAVAVTVGAD TVSGAGQRIP LDGTLTGRVM AEQQPLRVED AQLDALPEER DAATGPLIVL PMVAGTDHVS GVLLVGRNRG KRPFSDTDLA SAASFAGNVA ITLELARVKA DRERLVVLAD RGRIARDLHD HVIQRMFAVA LGLQDIAQYE RPSNAERINQ YVEDLDVTIK DIRRSIFELR ASGASKRSRL HAAIDRIAED VRPALGFTPT VRYSGPLETV IGDDLADQVI AVARESLTNA ARHSQAGTVE LRIGVAGESV VVDVIDDGVG IGPGGRRSGL DNLRTRAEQL GGSFTLTTPA GGGTHLHWAA PL
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