Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_3248 |
Symbol | |
ID | 3904419 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 3846477 |
End bp | 3847079 |
Gene Length | 603 bp |
Protein Length | 200 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637880573 |
Product | 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate |
Protein accession | YP_482334 |
Protein GI | 86741934 |
COG category | [C] Energy production and conversion |
COG ID | [COG1014] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit |
TIGRFAM ID | [TIGR02175] 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.567977 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCGCGG TACGAATTCA CGGGTTCGGC GGTCAGGGCG TGCTGACCAT CGCCGAGCTG TTGACCATCG CGGCAGTTAC GGAGGGTCGC TACGGACAGG CATCCATGGC CGGCGGGCCG GAACACATCG GCCACCCTAC GGTCGCCTGC TGCCGGATCG ACGACGATCC ATTGCCCGGG TGGGAACCGG TCGTGTTCCC GGATGCGGTC ATCGTCCGGG ACGCGGCGCT GCTGCACGTC TCCGACGTGT TCCATGGACT CGGGGCGGAT GGGTTCATCC TGCTCGACTC GGCACGCGAC CTTGACGATT TCGGGCTGCC CAGGCTCACC CGGTACCGGC CCGAGCGGAC GATCAGCATG CCCGCCAGCG AGATCGCCCA GCGTGAGCTG GGGCATCCGC TACCGAACAC GGCTCTGCTC GGTGGCTTTG CCGCGTTGAC CGGAATCGTT TCGATCATCG CGGTCGAGAC GGCCATCCGG GAGCGGTTCG CCGGTCGGCT CGCGGACGAC GGCATCGAGG CGGCTCGGGA CGCCTTTGCG TTCGTCCGCT ACACCGAGCG GCGCAGGGCC GGGCTTCTGC CGGTAGCCCA GGCCCAGGAA TGA
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Protein sequence | MFAVRIHGFG GQGVLTIAEL LTIAAVTEGR YGQASMAGGP EHIGHPTVAC CRIDDDPLPG WEPVVFPDAV IVRDAALLHV SDVFHGLGAD GFILLDSARD LDDFGLPRLT RYRPERTISM PASEIAQREL GHPLPNTALL GGFAALTGIV SIIAVETAIR ERFAGRLADD GIEAARDAFA FVRYTERRRA GLLPVAQAQE
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