| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3202 |
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| Symbol | pyrB |
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| ID | 3906168 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 3795822 |
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| End bp | 3796778 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637880526 |
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| Product | aspartate carbamoyltransferase catalytic subunit |
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| Protein accession | YP_482288 |
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| Protein GI | 86741888 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0540] Aspartate carbamoyltransferase, catalytic chain |
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| TIGRFAM ID | [TIGR00670] aspartate carbamoyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0897828 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGGAGCA CAAGCCGGGT TCGGGGGACG GGCGTGAACC GCCATCTCCT GTCGACTGAG
GATCTCGACC GGGACGACGC GCTGCTGGTG CTGGACACCG CCGAACGGAT GGCGCGGGTC
GCCGAGGCGT CGGTGCGCAA ACTGCCGACC CTGCGGGGCC GCACCGTCGT CAACCTGTTC
TTCGAGGACT CCACCCGCAC CCGTACGTCC TTCGAGGTAG CCGCCAAGAG ACTGTCGGCC
GATGTGATCA ATTTTTCGGC GCGCGGGTCA AGCGTGTCGA AGGGCGAAAG TCTGAAGGAC
ACGGCGCAGA CCCTTGAGGC GATGGGTGCC GACGCCGTGG TCTGCCGGCA TGCCGCGAGT
GGCGCGCCGC ACCGACTGGC CTCCTGGGTA CGCGGCAGCG TGGTGAACGC GGGAGACGGC
ACTCACGAGC ACCCGACCCA GGCCCTGCTC GACGCCTTCA CCATGCGCCG CCGGCTCGGC
CGGATCGACG GCCTCGCCGT CACCATCGTC GGCGACGTGC TGCATTCCCG GGTGGCGCGA
TCGAACGTGT GGCTGCTCGC CACGCTGGGC GCGACGGTGA CCGTCGTGGC CCCGCCGACG
TTGGTGCCCC TCGGAATCTC CTCGTGGCCG GTCGAGGTGT CGTACAACCT CGACGCCGTG
CTGCCCAAGA GCGACGTGGT GATGATGCTG CGGGTCCAGC GGGAGCGGAT GTCCGCGGCC
TTCTTCCCGA CCGAACGGGA GTACAGCCGG CGCTACGGGC TGGATGCCGA CCGGGCGGAG
ATGTTGCCCG ACCACGCCCT GGTGATGCAT CCCGGCCCGA TGGTACGCGG GATGGAGATC
GCCTCTCGGG TCGCCGACTC CGCCCGGTCG ACAGTCGTGG AACAGGTTGC GAACGGGGTG
AGCGTGCGGA TGGCCGTGCT GTACCTGCTG CTGGGTGGTT CCGGGGAGGT CTCATGA
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| Protein sequence | MGSTSRVRGT GVNRHLLSTE DLDRDDALLV LDTAERMARV AEASVRKLPT LRGRTVVNLF
FEDSTRTRTS FEVAAKRLSA DVINFSARGS SVSKGESLKD TAQTLEAMGA DAVVCRHAAS
GAPHRLASWV RGSVVNAGDG THEHPTQALL DAFTMRRRLG RIDGLAVTIV GDVLHSRVAR
SNVWLLATLG ATVTVVAPPT LVPLGISSWP VEVSYNLDAV LPKSDVVMML RVQRERMSAA
FFPTEREYSR RYGLDADRAE MLPDHALVMH PGPMVRGMEI ASRVADSARS TVVEQVANGV
SVRMAVLYLL LGGSGEVS
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