Gene Francci3_3169 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3169 
Symbol 
ID3903894 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp3755845 
End bp3757047 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content71% 
IMG OID637880493 
Productargininosuccinate synthase 
Protein accessionYP_482255 
Protein GI86741855 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0137] Argininosuccinate synthase 
TIGRFAM ID[TIGR00032] argininosuccinate synthase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0199881 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGAAC GCGTCGTGCT TGCCTACTCG GGCGGCCTCG ACACGTCCGT GGCCATCGGT 
TGGATCGGCG CCGAGACCGG CGCCGACGTC GTCGCGCTGG CGGTTGACGT CGGCCAGGGC
GGCGAGGACC TCGAGGCCAT CCGGCAGCGC GCCCTCACCT GTGGCGCGGT CGAGTCGATC
GTCGTCGACG CCCGTGAGGA GTTCGCCGAG TCCTTCGTCG CTCCGGCGAT TAAGAGCAAT
GCGCTCTACA TGGACCGGTA TCCGTTGATC TCGTCCCTGT CGCGACCCGT CATCGTCAGG
CATCTGGTCG CCGCGGCCCG CGAGCACGGG GCGGACGCCA TCGCGCACGG CTGCACCGGC
AAGGGCAACG ACCAGGTGCG CTTCGAGGTC GGGGTGGCGG CGCTCGCCCC CGGGCTGAGC
GTGCTCGCCC CGGTGCGCGA CTCGGGGATG ACCCGGGACA AGGCGATCGC CTTCGCGGAG
GAACGCGGCC TGCCGATCGA CGTGTCGAAG AAATCGCCGT ATTCCATCGA CCAGAACCTG
TGGGGCCGCA CCGCCGAGTG CGGCGTCCTC GAGGACCCGT GGGCCCAGCC GCCGGAGGAT
GTCTTCGTCT ACTCCGCGGA CCCCACCGTC GCGCGGATCC CCGACGAGGT GACCATCTCG
TTCATCGACG GTGTCCCGGT GGGGTTGGAC GGGCGCTCCC TCCCGCTCGC CGATCTCGTC
GCCGAGCTCA ACGTCCGGGC GGGCGCCCAC GGCGTGGGCC GGATCGACCT GATCGAGGAC
CGGCTCGTCG GCATCAAGAG CCGGGAGATC TACGAGTGCC CGGCGGCGAT CACGCTGCTA
ACGGCCCACC GGGACCTCGA GGACCTCACG CTTGAGCGGG ACGTCGCCCG GTTCAAGCGG
GGCATCGACC AGCGGTGGGG TGAGATCGTC TACGACGGTC TGTGGTACTC GCCGCTGAAG
AGCGCGTTGG ACGCCTTCGT CGACTCCGCC AGCGCCGGAG TGTCCGGGGA GGTGCGGATC
CGGCTCGTGG GTGGCGTCGC CCAGGTCGTC GGCCGGCGCA GCCCGGCCAG TCTGTACGAC
CACGCACTGG CCACCTACGA CGCCGGCGAC CAGTTCGACC AGCGCGACGC CCGCGGGTTC
ATCGAGCTCT GGGGTCTGCC GACGAAGGTC TGGGCGGCGC GCGAGCAGCG GCTGAACCCG
TGA
 
Protein sequence
MTERVVLAYS GGLDTSVAIG WIGAETGADV VALAVDVGQG GEDLEAIRQR ALTCGAVESI 
VVDAREEFAE SFVAPAIKSN ALYMDRYPLI SSLSRPVIVR HLVAAAREHG ADAIAHGCTG
KGNDQVRFEV GVAALAPGLS VLAPVRDSGM TRDKAIAFAE ERGLPIDVSK KSPYSIDQNL
WGRTAECGVL EDPWAQPPED VFVYSADPTV ARIPDEVTIS FIDGVPVGLD GRSLPLADLV
AELNVRAGAH GVGRIDLIED RLVGIKSREI YECPAAITLL TAHRDLEDLT LERDVARFKR
GIDQRWGEIV YDGLWYSPLK SALDAFVDSA SAGVSGEVRI RLVGGVAQVV GRRSPASLYD
HALATYDAGD QFDQRDARGF IELWGLPTKV WAAREQRLNP