| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3104 |
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| Symbol | |
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| ID | 3904230 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 3675959 |
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| End bp | 3677713 |
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| Gene Length | 1755 bp |
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| Protein Length | 584 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 637880425 |
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| Product | hypothetical protein |
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| Protein accession | YP_482190 |
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| Protein GI | 86741790 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0322] Nuclease subunit of the excinuclease complex
[COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
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| TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.197929 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.651768 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGCCCAG ATCCCGCCCC GGACCGTCCC CGGCCGCCCC GACAGGGCAG GCTGGATGAT
CTCGGTCGTC CGTTGGCGGA CGTGACCTTC GTCGTGTTCG ACCTGGAGAC GACGGGCACC
TCCCCGGGAC GCGACGAGAT CACCGAGATC GGCGCGGTCC GGGTCCGCGG CGGCCGGATC
CTCGCCGAGA TGGCCACCCT GGTCCGGCCG GGCGTCGGCA TCCCTCCGAT GGTCTCGGTG
CTCACCGGCA TCACCGACGT GATGGTGGCG ACGGCGCCGC CGGTCACGCA GGTGCTGCCT
ACCTTCCTGG AGTTCGCCCG CGGCGCCGTT CTCGTCGCCC ACAATGCCCC GTTCGACCTC
GGCTTCCTGC GCGCCGCCGT CGAGCTCTGC GGCTATCCGG TACCCGTCTG GGAGTATCTG
GACACGTTGC GTATCGCCCG GCGGGTGGTC ACGAGAGACG AGAGCCCCGA CTGCCGGCTC
ACGTCGCTGG CCTCGCTGTT CCGCAGCCCG GTCGAGCCCC GCCACCGGGC GCTGGCGGAC
GCCCGGGCCA CCGTCGACGT GCTGCACGGG CTGTTCGAAC GGCTCGGCAA CGCGGGCGTG
ACCACCCTGG AGGACCTGCA CGACTACAGC TCCCGGGTGT CGCCGGCCCA GCGACGCAAA
CGGCATCTGG CCGACGGCCT GCCGACGGGC CCGGGTGTCT ACATCTTCCG GGACGCCGAC
GAACGAGCCC TGTATGTCGG CACCTCGCGT TCGGTGCGCT CCCGGGTCCG TACCTACTTC
ACCGCCAGCG AGCCCCGGAC GCGGATGGCG GCGATGGTGG CGCTGGCCGA GCGGGTTGAC
GCGATCGGAT GCGCGCACGC CCTGGAGGCC GAGGTCCGGG AACTGCGGCT GATCGCCGAG
TACAAGCCGC CGTACAACCG CCGATCCCGC TTCCCGGAGC GCTCCGTGTA TCTCAAGCTC
ACCGACGAGC CATTCCCACG GCTTTCACGG GTGCGCGCCG CCCGTGACGA CGCGACCTAT
CTCGGGCCGT TCGGCAGCGT CCGCGCCGCC GACGCCGCCG CCGAGGCGCT GCTGGCCGCG
GTGCCGCTGC GCCAGTGCTC CGGGCGCCTG TCCCCGCGCG TGCGCCGGTC CGCCTGTACC
CTCGCCGACC TCGGCAGATG CGGAGCGCCG TGCGACGGCC GGGAGGACGT GGCGAGCTAC
GGCCGGCACG TCGCCGCCGC CCGGGCCGCC ATCACCGGCG ATCCGGGCCG GGTCATCGCC
GCCTCGACGC GGCGGATCGA CCGGCTGGCC GCCGAGCGGC GCTACGAGGA GGCCGCCGTC
CAGCGGGACC GGATGATCGC GTTCGTCCGC GCAGCCGCAC GTGCCCAGCG GCTGTCGGCC
CTCACCGGGG TCGCCGAGCT CGTCGCCGCG GCCCCGACCG CCGAGGCCGG CTGGGATCTG
GCCGTAGTGC GTCACGGTCG GCTGGTGTCG GCGGCGAGCG TGCCGCCCGG TGTCGATCCG
CGGCCCTGGG TCGACGCCGC GGTCGCCAGC GCCGAGACGG TGCGGCCGCG GCCCGGTCCG
GCCCCGTGCG CCTCCGTCGA GGAGACCGAA CGCATCGCCC GTTGGCTCGG TGGGCCTGGG
GTGCGGCTCG TGCGGCTGGA GGGCGAGTGG AGCTGGCCGG CCGCGGGCGC CATCCGCGCC
GCAGCCGGAT TCGGTGCGGC CCCCGGCCGG TCGGTACGTG CGTATGACGG TGACGGATGG
TTCCCGTCGG CCTGA
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| Protein sequence | MRPDPAPDRP RPPRQGRLDD LGRPLADVTF VVFDLETTGT SPGRDEITEI GAVRVRGGRI
LAEMATLVRP GVGIPPMVSV LTGITDVMVA TAPPVTQVLP TFLEFARGAV LVAHNAPFDL
GFLRAAVELC GYPVPVWEYL DTLRIARRVV TRDESPDCRL TSLASLFRSP VEPRHRALAD
ARATVDVLHG LFERLGNAGV TTLEDLHDYS SRVSPAQRRK RHLADGLPTG PGVYIFRDAD
ERALYVGTSR SVRSRVRTYF TASEPRTRMA AMVALAERVD AIGCAHALEA EVRELRLIAE
YKPPYNRRSR FPERSVYLKL TDEPFPRLSR VRAARDDATY LGPFGSVRAA DAAAEALLAA
VPLRQCSGRL SPRVRRSACT LADLGRCGAP CDGREDVASY GRHVAAARAA ITGDPGRVIA
ASTRRIDRLA AERRYEEAAV QRDRMIAFVR AAARAQRLSA LTGVAELVAA APTAEAGWDL
AVVRHGRLVS AASVPPGVDP RPWVDAAVAS AETVRPRPGP APCASVEETE RIARWLGGPG
VRLVRLEGEW SWPAAGAIRA AAGFGAAPGR SVRAYDGDGW FPSA
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