Gene Francci3_3066 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3066 
Symbol 
ID3904267 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp3634856 
End bp3635947 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content72% 
IMG OID637880387 
Productbeta-lactamase-like 
Protein accessionYP_482152 
Protein GI86741752 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.193945 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGTGAGG TCGTGGACGC TGCTCTCGGG GATGTCGGTG TGCCGCGTCA GACCGGGCCG 
CAGCCGGCCG TGGAGCGGGC CGGCCGGGAC GGTGCCGCGC GGTGGCGTCG GCCCCTGCCA
CCGGTCGAGC AGGTGCGTCC GGGACTGTGG AGTATTCCCG TCCCGTTGCC CTGGGCCAAA
CCGGCGCACG TGTTCGTGTA CGTTTTCGAG ACCTCCACGG GCCCGTTCCT GATGGACGCG
GGCTGGGACT TCGACGAGGC GTTCGACGAG CTGCAGGCCG GACTGGCGAT GATCGGGATG
TCGGTGGCCG ACGTGCGGGG CGTCGTGGTG ACCCATGCGC ACCTGGACCA CTACGGCCTG
GCGAACCGGA TCCGGGAGGC ATCCGGGGCG TGGGTCTCGT TGCATCGCCT GGACGAGGCG
ATGCTCCGGC ACTTCGAACA TGGTTACGCC GACCGGATCT CCGAGCTGAT GATCCGGGCC
GGGGCGCCCG CCGAGATGAC CGAGCGGCTG CTGGCGGGCT ACCAGCAGCC GGCCCCGGGC
CTATCGCGAC CCGACATCCT CCTCGAAGAC GGCGACCGGC CGGACATCCC GGGCTGGGAT
CTCACCGCGC TGTGGACACC GGGCCATTCG CCGGGACACC TCTGCTTCTG GGAGCCGACC
AACCGGCTGC TGTTCTCCGG GGACCACGTC CTGCCCTCGA CGGCGGTCGG GGTATCCGCG
CCGGAGGAGG CCGTTCCTGA TCCGCTGGGG GACTACCTGC GTTCGCTGGC CCGGCTGCGG
AGCCTGCCGG CCGAGGAGGT GCTGCCGGCG CACGAGTACC GGTTCACCGG GCTGGAGCGC
CGGCTCGCGG AGCTCGACGC GCATCACGCC GGCCGGCTGT CCGAGGTCGT CGAGGGACTG
CGCGCGGGTG CCTCGCGGGT CTGGGACGTC GCCGGATACG TGACCTGGCA TCGGCCGTTC
CGCAACCTGC GGGGGGTGGC GCTGCAGAAC GCCGTGATGG ACACGATGTC GTACCTCGCG
ACGCTGGAGG CAACCGGCGC GGCGCGTTCC GAGCCGGGAA CACCAGACCG GTGGCGCCTG
ATCGAGCCGT AG
 
Protein sequence
MGEVVDAALG DVGVPRQTGP QPAVERAGRD GAARWRRPLP PVEQVRPGLW SIPVPLPWAK 
PAHVFVYVFE TSTGPFLMDA GWDFDEAFDE LQAGLAMIGM SVADVRGVVV THAHLDHYGL
ANRIREASGA WVSLHRLDEA MLRHFEHGYA DRISELMIRA GAPAEMTERL LAGYQQPAPG
LSRPDILLED GDRPDIPGWD LTALWTPGHS PGHLCFWEPT NRLLFSGDHV LPSTAVGVSA
PEEAVPDPLG DYLRSLARLR SLPAEEVLPA HEYRFTGLER RLAELDAHHA GRLSEVVEGL
RAGASRVWDV AGYVTWHRPF RNLRGVALQN AVMDTMSYLA TLEATGAARS EPGTPDRWRL
IEP