| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3038 |
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| Symbol | |
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| ID | 3904391 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 3605027 |
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| End bp | 3607879 |
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| Gene Length | 2853 bp |
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| Protein Length | 950 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 637880358 |
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| Product | LuxR family transcriptional regulator |
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| Protein accession | YP_482124 |
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| Protein GI | 86741724 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3899] Predicted ATPase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCCGC GAGCACGGTC GCCCGAGCGG CGCGCGTCGG GGACTCGCAC AGGTGGCCCG
TGGTCATGGA CACCGGGACT CCCTCCGTCG AGTCGGGTAG TGGCTCGACA CGAGGCTCGC
ACTGGTCCGG CACCGCCCGC GTCGGTGAAA ACCACCTACA TCGGCGCGCA TACTGTTCCC
GTTGTGGGGA CACCGGTCCG GACGTTCGTC GGCAGGGGCG AGGAACGCCG CAGGCTCGAG
GTGCTGGTCG CGGGCGCCAA GAACGGCGAG GGCGGGGTGC TGGTGCTCCG CGGCGAGGCC
GGCATCGGCA AGAGCGCTCT GCTCGACCAC CTGCGGCGCT CGGCGCAGGG GATGCGGGTC
ATCGAGGCGA CCGGATCCCA GTTTGAGACC GAGCTCCCGT TCGCCGCGCT GCACCAGCTG
TGCGTCCCGG CCCTGGGCGA CCTCGCGGCA CTACCCCCGC CGCACCGCGC GGCACTGGAG
GCAGCGTTCG GCCTCGCCGA CGGCACACCA GAGATGTTCC GCATCGGCAT GGCGGCCCTG
GAACTGCTGG TCACCGCGGC GGGGTCGGAA CCGGTGCTGT GCCTCGTCGA CGAGGCCCAC
TGGCTCGACG ACGCATCGAC ACGGATACTG ACGTTCCTCG CGCGGCGCAT CTCGGCCGAA
CCGGTGGCGA TGGTGCTAGC CGCACGGCAC GGACTCGACG AGCTACCGAG CGTCGAGGTG
ACCGGGCTGG CCGACGACGA CGCCCGCCGG CTGCTGGTGG ACACCCGCGC CACGCTGGAC
GAGACCGTGC GGGACCGCGT GCTCGCCGAG GCCAGGGGCA ACCCGCTCGC GCTACTCGAA
CTGCCCGGCG CCGGCGGCTT TGCCCTGCCC GACGCGTCCT CGGTGCCCAG CAGGGTCGAA
CGCAGTTTCC AGGATCGTCT CGTGCCCCTG CCCGAGGACG TGCGATTGCT GCTGACCGTG
GCTAGCGCCG ACCCGACCGG TGACCCCGGC CTGCTGTGGG CCGCCGCCGA ACGACTCGGT
GTCGGCCCGG CGGCCGGCGC GCACGCCGAG GCGTCCGGGC TGGTCGAGCT CGGCCCGCGC
GTGCGGTTCT GCCACCCGCT CGCCAGGTCC GCGGTCTACC AGGCCGCCGC CGTCGAGGAC
CGCCACGCCG CGCACCAGGC GCTCACCGAG GTCACGGACC CGGAACGGGA CCCCGACCGG
CGGGCCTGGC ATCGCGCGCA GGCCGGTGCC GGCCCCGACG AGGACACCGC CGCGGAACTG
AACCGTTGCG CCACCCGTGC CGCGGCACGT GGGGGAGTGG CGGCTGCCGC GGCGTTCCTC
GCGCGGGCCG CTGCCCTATC CCGTGACCCC GCGCGCCGCA CCGAACGCAC ACTCGCGGCC
GCGCAGGCCC ACCTCGACTC CGGTGCACTC GACGCGGCGG ACGGCCTGCT CACCGCGGTC
ACGGTGGACG GGACCGACCC CGTCGCGCTG GCCAGGGTGG AGCTGATGCG CGGGCGGATC
ACGTTCGTGC GCCGGCGCGA CGGCGACGGT CCGGCGTTCA TGCTGCGCGC GGCCCAGCGC
CTCGCCGCGA CCGACCCACG GTGGTCGCGG GACTGCTTTC TCGACGCCGT CGAGATGGCC
CTGGTCGTCG GCCGGGCCAG CGGGGTCATG GACATGGTCG TCGAGGCAGC GCGCTCGGCG
CCGCCGGCAT CGGGCCCGCC GGACCTCCTG GACGCGCTGC TGCGGCTGGC GACGGAAGGA
CACCACGCGG CGGCGCGGCC GGTCCGCGAG ATCCTCGCCT CCCGTCCACA GTGGACACGG
CGACCGGCGC TCGCCGGGAT GCTCGCCGTG GAGCTCTGGG ACGCCGAGGC ACACGGCGTG
ATCACCGACT GGGTGCTGGC CTCCGCCCGA GAGTCGGGGT CGCCGCTCAC GCTCCGCCTC
GGTCTTGGCA TGGCGGCGGC CGGCGCGGTG CACACCGGTG ACTTCGCCGC CGCCACGTCG
GCGATCGCCG AGGAGGAGGC GGTGGCGGAC GCGGTCGGGG TGGAGCCGCT GGCGTATCCG
CAGCTGCACC TCGCCGCCTT GCGTGGCCGG GAGGCACAGG CGCGGGCGGT GATCGACAGT
TTCACCGCCG AGGCGACCGC GAGCGGCACC GGGCAGACGA TCGCCAACGC CGACTGGGCC
ACGGCCGTCC TGAGTAACGG CCTCACCGAC TACCCGGCGG CACTTGCCGC CGCCGAGGCG
GCCACCCGGC ACGGCGACCT GTTCGTCGCC GCGATCGCCC TGCCGGAACT GGTCGAGGCC
GCGGTCCGCT GCGGCGAGCA CGAGGTGGCC CGGTCGGGTT CGGTATCGCT CACCGAACGC
ACCGAGGGCA GCGGCACACC GTGGGCGCTG GGCGTCGGCG CCTACGCCCG CGCACTCGTC
ACCGGCGACG AGGACGACTT CGCCGCGGCC ATAGGTCACC TCGAGAAGAG CCCGCTCGCC
CCGTATCTGG CCAGGGCGCA CCTGCTCTAC GGCGAGTGGC TGCGCCGCCA GGGCAGGCGA
CGCGACGCCC GCCGGCAGCT TCGTACCGCC TACGACCGGT TCGCCGACAT CGGCATGGCG
GCCTTCACCG ACCGCGCCGC CGCCGAGCTG CGTGCGGCCG GCGCCGACGT GCGCGGCCGC
ACGTCGGGCA ACACCGACGA CCTCACCGCG CAGGAGACCC ACATCGCCCG CCTGGTCGCG
GACGGCGCCA CGTCAAAGGA GGTCGCGGCA CGGCTGTTCA TCAGCCCCCG CACCGTCGAC
GCCCACCTGC GCAATATCTT CCGCAAGCTC GGCATCACGT CCCGTCGCCA GCTCCGGGAC
CTGCCCGCAC TGCGTACCCC CACCGCCAGA TGA
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| Protein sequence | MPPRARSPER RASGTRTGGP WSWTPGLPPS SRVVARHEAR TGPAPPASVK TTYIGAHTVP
VVGTPVRTFV GRGEERRRLE VLVAGAKNGE GGVLVLRGEA GIGKSALLDH LRRSAQGMRV
IEATGSQFET ELPFAALHQL CVPALGDLAA LPPPHRAALE AAFGLADGTP EMFRIGMAAL
ELLVTAAGSE PVLCLVDEAH WLDDASTRIL TFLARRISAE PVAMVLAARH GLDELPSVEV
TGLADDDARR LLVDTRATLD ETVRDRVLAE ARGNPLALLE LPGAGGFALP DASSVPSRVE
RSFQDRLVPL PEDVRLLLTV ASADPTGDPG LLWAAAERLG VGPAAGAHAE ASGLVELGPR
VRFCHPLARS AVYQAAAVED RHAAHQALTE VTDPERDPDR RAWHRAQAGA GPDEDTAAEL
NRCATRAAAR GGVAAAAAFL ARAAALSRDP ARRTERTLAA AQAHLDSGAL DAADGLLTAV
TVDGTDPVAL ARVELMRGRI TFVRRRDGDG PAFMLRAAQR LAATDPRWSR DCFLDAVEMA
LVVGRASGVM DMVVEAARSA PPASGPPDLL DALLRLATEG HHAAARPVRE ILASRPQWTR
RPALAGMLAV ELWDAEAHGV ITDWVLASAR ESGSPLTLRL GLGMAAAGAV HTGDFAAATS
AIAEEEAVAD AVGVEPLAYP QLHLAALRGR EAQARAVIDS FTAEATASGT GQTIANADWA
TAVLSNGLTD YPAALAAAEA ATRHGDLFVA AIALPELVEA AVRCGEHEVA RSGSVSLTER
TEGSGTPWAL GVGAYARALV TGDEDDFAAA IGHLEKSPLA PYLARAHLLY GEWLRRQGRR
RDARRQLRTA YDRFADIGMA AFTDRAAAEL RAAGADVRGR TSGNTDDLTA QETHIARLVA
DGATSKEVAA RLFISPRTVD AHLRNIFRKL GITSRRQLRD LPALRTPTAR
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