| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3002 |
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| Symbol | |
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| ID | 3905499 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 3556292 |
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| End bp | 3558799 |
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| Gene Length | 2508 bp |
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| Protein Length | 835 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 637880322 |
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| Product | WD-40 repeat-containing serine/threonin protein kinase |
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| Protein accession | YP_482088 |
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| Protein GI | 86741688 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG0515] Serine/threonine protein kinase
[COG2319] FOG: WD40 repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.774494 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.214944 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGGGGA CGACACCACC TCCGCTGCCC GGCGACGCCG TGCGCCCGCT TCAGCTGACC
GATCCGCGGC GGCTCGGGGT CTACCAGGTG ATCGGCCGGC TCGGGCAGGG CGGCATGGGC
ACCGTCTTCC TCGGCCGGGC ACCCGACGGA AGCGCCGTCG CGATCAAGAT GATCAGGCCG
GAGCTCGCGC AACGGCCCGA ATTCCGCGCC CGGTTTGCCC GCGAGGCCGA GAGTGCTCGT
CGGGTCCGCC GGTTCACCAC GGCCGCCGTG CTGGACGCTG ATCCGTACGG GCCCCAGCCC
TATCTCGTGA CCGAGTTCGT CGAGGGTCCG ACGCTGTCGA GGCGCGTCTC CGTACGGGGG
CCGCTGCGGC CCGCCGATCT CGAACAGCTC GCGGTCAGCG TGACGACCGC CCTGAGCGCC
ATCCACGCGG CCGGGATCGT GCACCGCGAC CTCACCCCCG GCAACGTCCT GCTGTCCCCG
GTCGGCCCCA AGGTGATCGA CTTCGGCCTG GCCCGCGAGT TCAACGCGGA CACCGACCTG
AGCCACAACG TCCGGCACGC CATCGGTACG CCCGGTTACA TGTCCCCGGA GCAGATCCTC
GACGCACCGA TCACCTCGGC GGTCGACATC TTCGCCTGGG GCGCCGTCAT AATCTTCGCC
GCCACCGGGC ACGCGCCGTT CGGCACCGGT CGCATCGACG CCATTCTCTA CCGCATCGTC
AACGAGCCGC CGCGGCTCGA CGGAGTTGGC GGCGAGTTGC GCAACCTCGT CGAGATCGCG
ATGGCGAAGG ACCCGGCGGC CCGGCCGAGC GCGGAGGAGC TGCGGACGGC GCTGATCGGC
GGGGGTACCC TCCCCGCGCG CCCGGAGCCC GGCTCCATAC CGTCCGGACC GCCCGGCGCC
GGGCCCACCG GACGTGCCCG CCGCTGGGCT CGGCGCCGGC CGTCAGGCGC CGCGGGGTCG
GCGCCCAGGT CGGAGCCGCC GCCCCGCGGC ACGGGCAGCA CCGGCAGCAC CGGCGGTACC
GCCGCGAACG TGGCGGACAT GCCCGTCACC CAGCTGTCCC CGCCGCCTGT CGCCTCGCCG
CCGCCGATCC CAGCCCGGAC CCCGCCGCCG ATACCGGCCC GGACCTCCCC GCCGCGTGGA
CAGCCCGGGT CGGTACCCCC GCATCCAGCA GGAACCCCAC ACCCGCCGGC ACCCAGCCCA
TCACCGGCCC CATCCAGGCT GCGGTGGTCT CGGACGGCAC TGCTCGTCGC CGGACTCGCC
ATCGCGATCA CCGCCGCAAC GGTGCTGATC ATCGTGCCGC GCGGCGGTGG CCCGTCGCCG
GTGTCGGCGG CCGACCGCGC GTCCATCTCG TCGCGCCTGG CCGCGGACGC GGCGGCCCAG
CGGGCCCGGC AACCGGACCT GGCCGGCCGG CTGAGCCTCG CGGCCTACCG GATCGCCCCG
ACGGAGGCCG CGCGCGCGGC CGTCCTCGCG TCCTTCGCCC AGTCCACCGC CGCGCGGATC
CCCGCCGGCC CCGCGGCCTT CTCCGACATC GCGCTCAGCC CGGACGGCAC GACCCTCGCC
GGCACCGACG ACACCGGCAG CCTCCACCTC TGGAAGGTCG ACGCTGCCGG CCGGCCCACC
GCCACCACCG GGGGCTCCGC GAACGACCAT GCGCACGGCG TCGTGTTCGA CCGCTCGGGC
ACCCGACTCG CGACGGGTGG GGAGACCGAC GCCGGCCGGC TATGGGACAT CGCCGATCCG
GCGCGCCCCC GGCCGCTCAG CACGCTCGAC CCCCAGGCCA CGCCGGTCCA TCGGCTCGCG
TTGTCGAGCA GCGCGCATCT GCTCGTCACC GCCGGCGAGG ACTGGTCGGT GGGGCTGTGG
GACGTCGCCG ACCCGGCGCG GCCCGTCTCG ATCCAGTTGC TGATCGGCCG CGCCGGGCCG
GTGACGGATG TGGCACTGCG GCCGGACGGC GCCGTCCTCG CCATCGCCGG CGCCGGCGGC
CCCGTGCAAC TGTGGAACGT CCGCGACCCC CGCAGGCCCG TCCAGACGGC CTCGGTGCCC
GGCCACACCG GTGCGGTGAA CACCGTCGCG TTCAGTCCGG ACGGACGGCG GCTGGCCACC
GGCGGCGACG ACCGGATCCT GCAGGTCTCC GACGTCGGCG ATCCCGACCA TCCGCGGGTC
CTGCGCCGGC TGTCCGGCCA CACCGCCCCC GTCGCCGCCG TCGCCTTCAC CACCGACGAT
CATCTGGTGA GCGCGGACGG CGGTGGCGCG GTCGCCTACT GGGACCTCTC CGCCCCCACA
CCCCCGATGA CCCCCCTGGG CGTCCTGGAC GCACCCGCCC GGGCGGTGGC CGGGACCGGC
ACCGAGACCG TCGCGCTGAC CACCGACAAG GGGTCGGTCC TCCTCGGGAC GCTCGACCCG
GCCAGGCTGC GCCGGCTGGC CTGCGCCAAG CCGGGCGCGG CCCTGAGCCC GGCCGAATGG
AGCCGGCTCG TTCCCCGCCT CCCCTACACC GACTCCTGCT CCGGTTAG
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| Protein sequence | MTGTTPPPLP GDAVRPLQLT DPRRLGVYQV IGRLGQGGMG TVFLGRAPDG SAVAIKMIRP
ELAQRPEFRA RFAREAESAR RVRRFTTAAV LDADPYGPQP YLVTEFVEGP TLSRRVSVRG
PLRPADLEQL AVSVTTALSA IHAAGIVHRD LTPGNVLLSP VGPKVIDFGL AREFNADTDL
SHNVRHAIGT PGYMSPEQIL DAPITSAVDI FAWGAVIIFA ATGHAPFGTG RIDAILYRIV
NEPPRLDGVG GELRNLVEIA MAKDPAARPS AEELRTALIG GGTLPARPEP GSIPSGPPGA
GPTGRARRWA RRRPSGAAGS APRSEPPPRG TGSTGSTGGT AANVADMPVT QLSPPPVASP
PPIPARTPPP IPARTSPPRG QPGSVPPHPA GTPHPPAPSP SPAPSRLRWS RTALLVAGLA
IAITAATVLI IVPRGGGPSP VSAADRASIS SRLAADAAAQ RARQPDLAGR LSLAAYRIAP
TEAARAAVLA SFAQSTAARI PAGPAAFSDI ALSPDGTTLA GTDDTGSLHL WKVDAAGRPT
ATTGGSANDH AHGVVFDRSG TRLATGGETD AGRLWDIADP ARPRPLSTLD PQATPVHRLA
LSSSAHLLVT AGEDWSVGLW DVADPARPVS IQLLIGRAGP VTDVALRPDG AVLAIAGAGG
PVQLWNVRDP RRPVQTASVP GHTGAVNTVA FSPDGRRLAT GGDDRILQVS DVGDPDHPRV
LRRLSGHTAP VAAVAFTTDD HLVSADGGGA VAYWDLSAPT PPMTPLGVLD APARAVAGTG
TETVALTTDK GSVLLGTLDP ARLRRLACAK PGAALSPAEW SRLVPRLPYT DSCSG
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