Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_3000 |
Symbol | |
ID | 3905497 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 3554118 |
End bp | 3555185 |
Gene Length | 1068 bp |
Protein Length | 355 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637880320 |
Product | hypothetical protein |
Protein accession | YP_482086 |
Protein GI | 86741686 |
COG category | [R] General function prediction only |
COG ID | [COG1253] Hemolysins and related proteins containing CBS domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.911183 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.462352 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGACC TGCTGGCGAT CGTCGCCACC GTCGTCCTGC TGGCGCTGAA CGCGCTGTTC GTCGGGGCCG AGTTCGCGCT GATCTCGGCC CGGCGGTCGA ACTTGGAGCC GATGGCCGAG GCGGGCTCAC GACTGGCAAA GATCACCCTT GGGGCGATGG AGAACGTCTC GTTGATGCTC GCCGGGGCGC AGCTTGGCGT CACCGTCTGC ACCCTGGGCC TCGGCGCTCT CGGGGAACCG GCGGTCGCGC ATCTGCTCCG CGGGCCGTTC GAGGCGGCCG GGATGCCCTC CGCCCTGCTG CACCCGGTGG CCTTCGCCAT CGCGCTGGGC CTGGTGACCT TCCTGCACGT GGTCGTCGGC GAGATGGTCC CGAAGAACAT CGCGCTGGCG ATGCCGGAGC GTGCGGTCCT GCTGCTCGCC CCGCTCCTGG TCGGAGTCGT CCGAGGCGGC AAGCCGGTCA TCGCGCTGCT CAACACGATC GCGGCCGTGT CGTTGCGGCT CGTCGGTGTC GAACCGAAGG ACGAGATCGC GAGCGTCTTC ACCCGCGACG AGGTCGCCGG ACTCATCGAG GAGTCGCATC GGGAGGGTCT GCTCGCCGAG GACGAGCACG ACCTGCTGAC CGGGGCGCTG TCGTTCGAGG AACGCACCGC GCGTGCCGTC CTGCTCCCGC CGGACGGGCT GGTCACCGTG TCCCCGGCGG TCACTCCCCG GCAGGTCGAG CAGCTCGCCG CGCGCACCGG ATTCACCCGC TTCCCGGTGC GGGACCCCGA GGGCGGGCTG ATCGGCTACC TGCACCTCAA GGACGTGCTG GAGACCCGGC CGGAGCGGCG GTCCAGCTCG GTCGCGGCCA AGTGGATCCG GCCGCTGGCC CGGGTCGGCG CCGACGACAA CCTGCGGACG GCACTGGCGA CAATGCAGCA CTCCGGCGCG CATCTGGCCA GGGTCACCGA CGCCGACGGT ACGGTCCTCG GGCTCGTCGC GCTGGAGGAC ATCCTGGAGG AGCTGGTCGG GGAGATCCGC GACGACGCCG TTCGCACGGC CGTGGTCCCC ACCCACCAGC CCGCCTGA
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Protein sequence | MTDLLAIVAT VVLLALNALF VGAEFALISA RRSNLEPMAE AGSRLAKITL GAMENVSLML AGAQLGVTVC TLGLGALGEP AVAHLLRGPF EAAGMPSALL HPVAFAIALG LVTFLHVVVG EMVPKNIALA MPERAVLLLA PLLVGVVRGG KPVIALLNTI AAVSLRLVGV EPKDEIASVF TRDEVAGLIE ESHREGLLAE DEHDLLTGAL SFEERTARAV LLPPDGLVTV SPAVTPRQVE QLAARTGFTR FPVRDPEGGL IGYLHLKDVL ETRPERRSSS VAAKWIRPLA RVGADDNLRT ALATMQHSGA HLARVTDADG TVLGLVALED ILEELVGEIR DDAVRTAVVP THQPA
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