Gene Francci3_2981 details

Gene Information

• Locus tag: Francci3_2981
• ID: 3905477
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Frankia sp. CcI3
• Kingdom: Bacteria
• Replicon accession: NC_007777
• Strand: +
• Start bp: 3525223
• End bp: 3531468
• Gene Length: 6246 bp
• Protein Length: 2081 aa
• Translation table: 11
• GC content: 74%
• IMG OID: 637880301
• Product: beta-ketoacyl synthase
• Protein accession: YP_482067
• Protein GI: 86741667
• COG category: [I] Lipid transport and metabolism; [Q] Secondary metabolites biosynthesis, transport and catabolism; [R] General function prediction only
• COG ID: [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); [COG3321] Polyketide synthase modules and related proteins

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 9
• Fosmid unclonability p-value: 0.365898
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCGCGATA CGCGCGAAAT CCAGGCACGA TCGCCGCGCG GCACCGGTGG TGGGGCGAGC 
GAGGCGTGGC GTCTGCGGCT GACCGGCCGA TCGGAGACGG CCCAGCGCGA GCTCCTGCTG 
GACCTGATAG CCGGCCGGGT CGCCGTGCTG ACCGAGCGCA GCGGCGACGC GGCCATCCTC 
GGCCGGGAGT CCTCCTGGCG TGGTCTCGGG GTGTACCGCG GCATCGCCGA TCGGCTGCGA 
GACGAACTGT CCGCTGCGAC GGGTCTGCGC CTGCCCGCGA CGCTGTTGTT CGACCGGCCC 
TCCCCCGAGG CCCTCGCCGA CCATCTGCGC CGTGAGTTGC TGGGTATCGA CGAGCCCGCC 
GCCGTCCCCG CCGCCGTCCC CGCGGCCGTC CCGCCGGCCA CCGCCGTTCC TGCCACCGGC 
GAGGTCGGCT CGGAGCCGTT CCGGGGCCAT GATCCCGTAG TCATCATCGG CATGGCCTGC 
CGGCTGCCCG GCGGCGTCGA CTCACCGCAA GCCCTGTGGG ACCTGGTGCG AGAGGGCCGG 
GATGCCGTCG GCGGCCTGCC CGACGACCGG GGCTGGGACC TCGACGCGCT CTACGACCCT 
GATCCCGATC AGCCTGGCAC CGCCTACACC CGCCATGGCG GGTTCCTGCC CGGCATCGCG 
CTGTTCGACC CGGGATTCTT CGGTATCGGT CCGCGCGAGG CACATGCCGT GGACCCGCAG 
CAGCGGCTGA TGCTGGAGAT CTCCTGGGAG GTGCTGGAGC ACGCGGGCAT CGACCCACGG 
TCGCTGCGGG GCAGCCGGAC CGGCGTCTTC ACCGGGGTGT CGCTGCAGGA CTACGGCCCC 
GCCTGGCATG CGGCGCCCGC CGAAGCCCAG GGACAACTAC TCACCGGCAA CGCCTCCGGC 
GTGATCGCCG GCCGCGTCTC CTACACGCTT GGCCTGGAAG GGCCCGCGTT GACCATCGAC 
ACCCAGTGTT CCTCGTCCCT GGTGGCGGTG CATCTGGCCG GCCATGCGCT GCGGGCCGGC 
GAATGCGACC TCGCCTTGGC CGGTGGGGTG ACCGTGATGT CGACCCCAGG GATCCTGGTG 
GAGTTCAGCC GCAAGCGGGG CCTGGCGTCG GACGGGCGGT GCAAGGCGTT CTCCGCCGAC 
GCCGACGGCA CCGGCTGGGC CGACGGCGCG GGCGTGCTGC TGCTGGAACG GCTCTCCGAC 
GCCCACCGTA ACGGCCATCA CGTCCTCGCG GTCCTGCGTG GCACCGCGAT CAACCAGGAC 
GGCGCCAGCA ACGGGATGAC CGCGCCGAAC GGCCTGTCCC AGCAGCGCCT GATCCGCCAG 
GCGCTGGCCA ACGCCGGGCT GCGCGCCGCC GACGTCGACG CGGTGGAGGC GCACGGCACC 
GGCACGACGC TCGGTGACCC GATCGAGGCC CAGGCCGTCA TTGCCACCTA CGGCCAGGAC 
CGTGCGGCAC GGCGGCCCGT CTACCTCGGG TCCCTGAAGT CGAACATCGG CCACACCCAG 
GCCGCCGCCG GCGTCGCCGG GATCATCAAG ATGGTGCAGG CGATGCGGCA CGGCGTCCTG 
CCGCGGACCC TGCACGTGCG CGAGGCGTCC CCGCACGTGG ACTGGTCGGC GGGCGACGTC 
GCCCTGCTCA CTGGAAACGT CCCCTGGCAG CGCCGGGACG GCCGGCCGCG ACGGGCGGCG 
GTGTCGGCGT TCGGGGTAAG CGGCACCAAC GCTCACGCCG TGATCGAGGA AGCACCACCC 
GGGCCGGGAA CGGACGCCAT GGGTGCGGAC CGCGCCGGAG AGAACCCGGC GAGCGCCCCG 
GTGCCTGTCG TCCTGTCCGG CCGCTGCGAC GCGGCGCTAC GTTCGGCGGC CGCCCGGCTC 
GGCGCGCACC TGGAGCGCCA TCCCGAGATC TCTCCCCTGG ACGCGGGATA CACCATGGCG 
GGTCGCACCC ACTTCGAGCA CCGTGCCGTC GCCGTCGTCC GCGGATCGGC GGCGTGCGGC 
AGCGGCACAC ACCTGACCGG GACCGGGACC CTGACCGGGA CCCTGGCTGC TCTGGCCGAG 
GCCCGTCCCA GCGCCGGGCT GGTCCTGGGC ACGGTCCGAC CAGCGCTCCG CCGAAGCGGA 
ACCGCCCGGG GGGCAACCGC CTTCCTGTTC ACCGGCCAGG GCAGCCAACG CCCCGGGATG 
GGCCGCGAAC TCCATGCGAC CTACCCGGTC TTCGCCAACG CCCTCGACGA CGTCTGTGCC 
CACTTTGCGC CGCATCTCGA ACACCCACTG CGCGACGTCA TGTTCGCCCC CGCCGGTTCC 
CCGGGCGCGG CGGCGCTCGA CCGCACCGAG TACACCCAGC CCGCGCTGTT CGCCTTCGAG 
ACCGCGCTGT TCCGGCTCCT CGAATCCTGG GGTCTCGCCC CGGGGATCCT CGCCGGGCAC 
TCCATCGGCG AGCTCACCGC CGCCCACGTC GCCGGAGTGT GGACCCTCGA CGACGCCTGC 
GCTCTCGTCG CGGCCCGCGG CCGGCTCATG CAGGCCTGCC GCGCCGGCGG AGCCATGACC 
GCCATCCGCG CCGGCGAGGC GGAGGTCGCC GAGTCCCTCG CCGGACTCGC CGGGCGGGTC 
GAGATCGCCA CCGTCAACGG CCCGAGCGCC ACCGTCATCG CCGGCGACGC CGACCTCGTC 
GAACGCGTCG CCGTCGGCTG GGCCGAGCGC GGCCGCGCCA TCAGGCGGCT GACGGTCAGC 
CACGCCTTTC ACTCCCCGCA CATGGACGAC ATGCTCGACC GGTTCCGAGC CGTCGCCGAG 
AAGATCACCT ACTCCCCGCC GGCCATCCCC GTCGTCTCCA CCCGGACCGG CGACCTCGAC 
CTCCAGGCCG GGCTCACCAC CCCCGACCAC TGGGTACGCC ACGTCCGCGA ACCCGTCCGT 
TTCCTCGACG CCGCCCGTCG CCTGCACCGC GAAGGCGCCG TCGCCTACCT CGAACTCGGT 
CCCGACGCCG TCCTGACCGC GCTCCTGCCG GCCTGCCTAG CCGCCGACGC CCAGCGCACC 
GAGAAGACCC AGCGCACCCA AAGCACCCAA AGCACCCGGG ACGCCCAGAA CACCCGCGAC 
GCCCGGGACA CGGTGGCCGC GGCGGCGTCC CGCGCCGGCC GCCCCGAACC CGACACCCTC 
CTCACCGCCC TGGCTGAGCT GCACGTCCAC GGCGTCGACG TCGACTGGCG CGCCCTGTAC 
CGGGGACGCG GCGCCCGGCA CCGGGAGCTG CCCACCTACC CGTTCCAGCG CAGGCGCTAC 
TGGCTCGACG GGACCACCGC TGTCCCCGCG CCCCGTAGCC CGACCGTCGG GACGGCCCGC 
GCGGCGGACC CGGACGGCTG GTCTTACCGC ACCGAGTGGC GGCCCCTGGA CTCCGAGGAC 
GTCACCACCG CCGTGACGGC CCAGGCCATC GCCGTGACGG CCCAGGCCAC CGCGACGCCA 
CCGCTGTCCG GCGTGTGGCC GGTGCTGACC CCGGCCGCCG CCGTCGACGA GGACATGCTC 
TCCCGCATCT GCTGGATCAT CGAACGCCTC GGCGGCACGG CCGTCACCCT CACCCTCACC 
GGCGACGACG CCGACCGCGC CCGGGTCGCG GCGCTGCTGT CGAACGCCAT ACCGCTGCCC 
GACGCCATAC CGCCGTCGGG CGCCATACCG CCGTCGGGCG GCGGCCCCGC CGGGAAGAAG 
ACGGTGCAGG CGGTACGCGG CGTCCTGTCC CTGCTCGCCC TCGACGACAC GCCGCACCGC 
ATCCATCCGG CGCTGACCAC CGGGCTCGCC CTCACCGTCC CGCTCGTCCA GGCGCTACAC 
GACCTCGACG TGTCCGCACC GCTGTGGTGC GTCACCCGCG GCGCGGTCAC CACCGGTCCC 
GACGACCCCG TCACCACCCC GGACCAGGCC ATGATGTGGG GACTCGGCCG CGCCCTCGCC 
CTGGAGGACC CCGACGCCTG GGGCGGTCTG ATCGACATCC CGACCAACCT CGACGATCAG 
ACGCTGGCGT GGTTCGGCTC CGCCCTCACC GCCCCCGGTA GCGAGGACCA GCTCGCCGCC 
CGTGCCACCG GGCTGTTGGT ACCCCGCCTC GTCAGAGCCG ACACCGTCGG TGCAGCAGAC 
AACACCGTCG GTGCACCGAC CGACACCGTC CCGCCAGCGT GGCGGCCTCA CGGCACGGTC 
CTGATCACCG GTGGCACCGG CGCCCTCGGC GCGCATGCCG CCCGCCGGCT CGCCCGCGAC 
GGTGCGCGCC GGATCGTCCT CGTCAGCCGC CGTGGCCCCG CGGCTGCGGG GGCGGAGGAC 
CTACGCGCCG AACTCGCCGC CCTCGGCGCC GAGGCGACCA TCGAGGCCTG CGACGTGGGA 
GAGCACGAAC AGCTCGCCGC CCTGCTGCGG AGACTGGCCA AGGCGGGCCG GCCGGTGTCC 
GCCGTCGTGC ACGCGGCCGG TGTCATGGGG CAGGTGACCG CCCTACACAA ACTCGATCTC 
GGGGAGTTCG CGGAGGTCGT GGCCGGGAAG GTCGCCGGCG CCGCCGGCCT CGACCGGCTA 
CTCGACGGCA CCGGCGGGAT CACCGGCACC AGCGACACCA GCGACACCGA CGGGATCACC 
GGCACCAGCG ACACCAGCGG CACCAGGCTG GAGGCCTTCG TCCTGTTCTC GTCGGTGTCG 
GCGACCTGGG GCAGTGGCGG CCAGGCCGCC TACAGCGCGG GCAACGCCTA CCTCGACGCC 
CTCGCCGCGC GGCGGCACGC GCTTGGTCTC GCCGCCACCT CTGTCGCGTT CGGCCCGTGG 
GCCGATGCCG GAATGGGCGC CGAGGCCACG TTCCGTGACT ACCTGGGCCG CCGTGGCCTG 
ACCCCGCTGC CCCCCGACGC GGCGGTCACC GCGCTCACCC GGGCGGTCGC GGGCGGGCAG 
GCCGCGCTCA CCGTCGCCGA CGTCGACTGG GAGCGCTTCC TCCCACCCTT CACCGCCGCC 
CGCCCCGGGC GTTTCTTCGA CGATCTATGG AGCCGGTCCA CGACGGCCGG ACCCGAGGGG 
GACGCCGACC CGACCGGCAC CGACGCGCCC CCCGCCCGGG TGGACTACGG GACGCTGCCC 
GGGCCTGCCC GCGCCCGCGC GCTGTTCGAC CTCGTGCGGG CGGAGGCCGC GGCCATCCTC 
GGGTACCCGT CGCCCGACGA CGTGGACCCG CAGCGCCGCT TCCTCGAACT CGGCTTCGAC 
TCACTGGCCT CGGTTCAGCT CAGCCGCCGA CTGGCCGCCG CCACCGGCCT CACCCTGGCC 
ACGCCCGTCG TCTTCGAGCA TCCGACGGTC TGCGAGCTCA CCCGCCATCT CGATACCCTT 
GCCACCCTTG CCACCCTCGC CACCCAGCGG CACCCGGACA TCGTGCCCGG CGGACCCCCC 
GCGCGGGCCG GGACGCAGGT CGCGCCGATC GGCGTGCGCG AGCTGTACCG GCAGGCGTGC 
ACGGACGGCA AGTTCGCCGA GGGCGTCGGT GTCCTGCGGG CCGCCGCCCG GCTCAGGCCC 
GTCTTCCGCA CCGTCGAGGC CTTCGGCGCG CCCGCCGCGC CGGTGAGACT CGCCTCGGGT 
CCGGCCAGGC CCACCATCGT CTGCCTGCCC TCGATGGTTG CCCCGTCGGG ACCGCACAAC 
TTCGCCCGCC TCGCCCTGCA CCTGCATGGC CGGCGGGACG TGTACGCGCT GCCGCATCCC 
GGATTCGGCG ACGGGGAGCT GCTTCCGGCC ACCGCGGATC TCGTCGTCGA CCTGCATGCC 
GAGACCATCG CCCGGGCGTT CGACGAGATC CCCCTCGTGC TAGCGGGTTA CTCCTCGGGT 
GGCTGGCTGG CACATGCGAT CGCGGCCCGG CTGGAGACCC GCGGGATCCA CCCCAGGGCG 
GTGGTGCTGC TCGACACGTG GCTGCCCGGG GACCGCATCC CCGAGGGTGA CATCCAGGAG 
GAGCTTCGCG GCGTCGCCCT CAACGACCAG GCCTTCGCGC TGATGACGGA GGCACAGGTC 
ACCGCGCAGG GCGCCTACCT GGACCTGTTC GAGGGCTGGC GGCCGACCGC CGTCAACGCG 
CCGGTCGTCC TCGTCCGGGC GATGGAGCGC ATGCCCCAGC AGGCGGTCGC CGAGAACCCC 
GACGGGGAGG GCCAGGCCTG GGTGACCGAC TGGGTGATGG AGCACGAAAG GCTCGACGCC 
GCCGGCAATC ACCAGACGAT GATGAACGAA CACGCCGCCT CCACCGCCGC GGTCCTCCAC 
CAGTGGCTCA CAGAACTGGA GCGGCCCACG GAACTGGAGC GGCCCACAGA ACTGGAGCGG 
CGCTGA 

 

Protein sequence

MRDTREIQAR SPRGTGGGAS EAWRLRLTGR SETAQRELLL DLIAGRVAVL TERSGDAAIL 
GRESSWRGLG VYRGIADRLR DELSAATGLR LPATLLFDRP SPEALADHLR RELLGIDEPA 
AVPAAVPAAV PPATAVPATG EVGSEPFRGH DPVVIIGMAC RLPGGVDSPQ ALWDLVREGR 
DAVGGLPDDR GWDLDALYDP DPDQPGTAYT RHGGFLPGIA LFDPGFFGIG PREAHAVDPQ 
QRLMLEISWE VLEHAGIDPR SLRGSRTGVF TGVSLQDYGP AWHAAPAEAQ GQLLTGNASG 
VIAGRVSYTL GLEGPALTID TQCSSSLVAV HLAGHALRAG ECDLALAGGV TVMSTPGILV 
EFSRKRGLAS DGRCKAFSAD ADGTGWADGA GVLLLERLSD AHRNGHHVLA VLRGTAINQD 
GASNGMTAPN GLSQQRLIRQ ALANAGLRAA DVDAVEAHGT GTTLGDPIEA QAVIATYGQD 
RAARRPVYLG SLKSNIGHTQ AAAGVAGIIK MVQAMRHGVL PRTLHVREAS PHVDWSAGDV 
ALLTGNVPWQ RRDGRPRRAA VSAFGVSGTN AHAVIEEAPP GPGTDAMGAD RAGENPASAP 
VPVVLSGRCD AALRSAAARL GAHLERHPEI SPLDAGYTMA GRTHFEHRAV AVVRGSAACG 
SGTHLTGTGT LTGTLAALAE ARPSAGLVLG TVRPALRRSG TARGATAFLF TGQGSQRPGM 
GRELHATYPV FANALDDVCA HFAPHLEHPL RDVMFAPAGS PGAAALDRTE YTQPALFAFE 
TALFRLLESW GLAPGILAGH SIGELTAAHV AGVWTLDDAC ALVAARGRLM QACRAGGAMT 
AIRAGEAEVA ESLAGLAGRV EIATVNGPSA TVIAGDADLV ERVAVGWAER GRAIRRLTVS 
HAFHSPHMDD MLDRFRAVAE KITYSPPAIP VVSTRTGDLD LQAGLTTPDH WVRHVREPVR 
FLDAARRLHR EGAVAYLELG PDAVLTALLP ACLAADAQRT EKTQRTQSTQ STRDAQNTRD 
ARDTVAAAAS RAGRPEPDTL LTALAELHVH GVDVDWRALY RGRGARHREL PTYPFQRRRY 
WLDGTTAVPA PRSPTVGTAR AADPDGWSYR TEWRPLDSED VTTAVTAQAI AVTAQATATP 
PLSGVWPVLT PAAAVDEDML SRICWIIERL GGTAVTLTLT GDDADRARVA ALLSNAIPLP 
DAIPPSGAIP PSGGGPAGKK TVQAVRGVLS LLALDDTPHR IHPALTTGLA LTVPLVQALH 
DLDVSAPLWC VTRGAVTTGP DDPVTTPDQA MMWGLGRALA LEDPDAWGGL IDIPTNLDDQ 
TLAWFGSALT APGSEDQLAA RATGLLVPRL VRADTVGAAD NTVGAPTDTV PPAWRPHGTV 
LITGGTGALG AHAARRLARD GARRIVLVSR RGPAAAGAED LRAELAALGA EATIEACDVG 
EHEQLAALLR RLAKAGRPVS AVVHAAGVMG QVTALHKLDL GEFAEVVAGK VAGAAGLDRL 
LDGTGGITGT SDTSDTDGIT GTSDTSGTRL EAFVLFSSVS ATWGSGGQAA YSAGNAYLDA 
LAARRHALGL AATSVAFGPW ADAGMGAEAT FRDYLGRRGL TPLPPDAAVT ALTRAVAGGQ 
AALTVADVDW ERFLPPFTAA RPGRFFDDLW SRSTTAGPEG DADPTGTDAP PARVDYGTLP 
GPARARALFD LVRAEAAAIL GYPSPDDVDP QRRFLELGFD SLASVQLSRR LAAATGLTLA 
TPVVFEHPTV CELTRHLDTL ATLATLATQR HPDIVPGGPP ARAGTQVAPI GVRELYRQAC 
TDGKFAEGVG VLRAAARLRP VFRTVEAFGA PAAPVRLASG PARPTIVCLP SMVAPSGPHN 
FARLALHLHG RRDVYALPHP GFGDGELLPA TADLVVDLHA ETIARAFDEI PLVLAGYSSG 
GWLAHAIAAR LETRGIHPRA VVLLDTWLPG DRIPEGDIQE ELRGVALNDQ AFALMTEAQV 
TAQGAYLDLF EGWRPTAVNA PVVLVRAMER MPQQAVAENP DGEGQAWVTD WVMEHERLDA 
AGNHQTMMNE HAASTAAVLH QWLTELERPT ELERPTELER R