Gene Francci3_2877 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2877 
Symbol 
ID3906008 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp3394252 
End bp3394641 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content67% 
IMG OID637880198 
ProductPilT protein-like 
Protein accessionYP_481964 
Protein GI86741564 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.013961 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.385493 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAATTATC TGGACTCCAG CGCATTGATG AAGTTGACCC ATCCGGAGCG TGGGACGCGT 
GCGCTGCGCT CCTGGCTTGC CGTCCGGCCA GGCGTCGCGG TGTCGTCCGC GCTTGTGATG
CTCGAAGTGA CCCGAGCGTT GCGCCGCAGC GACCCCGCCG CTCTTCCCCG TATCCCCGAC
GTCCTGTCGC GGATCACGCT CGTGCCCATC GACCAACCGA TCATGGTCTC CGCCGCGGCC
TTGACGGATC CGTTGCTGCG TTCGCTGGAT GCCCTGCATC TCGCGACGGC GCTCCGGCTC
GATGCGCCGT CACTGGTCTT CGTCAGCTAC GACAAGCGCC TGTCGACCGC CGCCGCCCAG
GAAGGCCTGA CCGTTGCTGT GCCCGCCTGA
 
Protein sequence
MNYLDSSALM KLTHPERGTR ALRSWLAVRP GVAVSSALVM LEVTRALRRS DPAALPRIPD 
VLSRITLVPI DQPIMVSAAA LTDPLLRSLD ALHLATALRL DAPSLVFVSY DKRLSTAAAQ
EGLTVAVPA