Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_2874 |
Symbol | |
ID | 3906005 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 3389367 |
End bp | 3391181 |
Gene Length | 1815 bp |
Protein Length | 604 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 637880195 |
Product | serine/threonine protein kinase |
Protein accession | YP_481961 |
Protein GI | 86741561 |
COG category | [K] Transcription [L] Replication, recombination and repair [R] General function prediction only [T] Signal transduction mechanisms |
COG ID | [COG0515] Serine/threonine protein kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.422639 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.298046 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTGACGC CCCTGACCAC GGACGATCCC CGACGCATCG GCCCCTACCG GCTGGCGAAC CGCATCGGCG CGGGTGGGAT GGGCGTCGTC TACCTCGGTT TCGGCACCGA CGGCAGGCCT GCGGCCGTGA AGGTGCCGTC GGCCGGACTC GCCGACGATC CCGAGTTCCG GTCCCGTTTC CGGCACGAGG TCGACGCGGC CCGCCGGGTC AGGGGCAGCG CCGTCGCCGC TGTGCTCGAC GCCGACCTGA CCGGGCAACG GCCGTGGATG GCCACGGAGT ACGTCGAGGG CAGGAACCTG GCGGACGCGG TCGCCACCCG CGGCCAGCTC GACGATCGAC TGGTCCAGGG ACTCGCCGTC GGTCTGGCCG ACGCCCTGGT CGCGATCCAT GCCGCCGGGG TGGTGCACCG CGACCTCAAA CCGGCGAACA TCCTGCTCAC CTGGGACGGC CCGAAGGTCA TCGACTTCGG CATCGCCCGC GCCGGGGACA ACACGAGCCA CACCCGGACG GGAATGCTGA TCGGCACCCT GGTCTGGATG GCGCCCGAGC AGCTGCGCGG CGAGCGGGCC GGACCCGCGG CCGACATCTT CGCCTGGGGG GCCTGCGTCA CCTTCGCCGC CGCCGGCCGG CCCCCCTTCC GGGGCGAACG GGCGGAGGCG ATCGGCCTGC AGATCCTCAC CGCGGAGCCC AACCTCGACG GGTTGCCCGC GTCCCTGGTC GGCGTCGTGC GGGCGGCCCT GGACAAGGAG CCGGCGCGCC GCCCCGCCGC CACCGAGCTG CTCGCCCGAC TGGTCGGCCA CGACGTCCGC TCCCCCGCCG AATCGGACCG GGCCAGCGAG ACGGCGCTGG CCCGCTGGTG GTCGTTGCCG CCGACCCCGC CGGACGGCGA GGGTCCCCAC GGGGGGTACC GCGACGCCGG CTACGGTCCC GATCCCGCCC ACCACCGCGC GTCCGCCCAC CACCGCGCGT CCGCCCACCA CCGCGCGTCC GCCCCGCCGA CCGTGAGCCA CGGCGCTGAC GGCTGGGAGG ACGACGGGTG GCGCGTCGGG TCGGGCAGAG GCGGGAGCGG GGGCGGCGGG CGGCGTGGAG CCGTCGTGGC GGTGGCCGCG CTGCTCGCGG TGCTGCTCAG CGGGGGCCTC GCGGCGGCCC TGGTGCTCAA CCGTAGCGAC GACACGCCCA CCATCACGGG GTCGACGCCA GACCCGCTGG CGACGGCGGG GACGGCCGCC GGGACGGCGG GGACGGCCGC CGGGACGACG GGTCCGTTGC AGGCCGCCGG GACGACGGGT CCGTTGCAGG CCGCCGGGAC GACGGGTCCG TTGCAGGCCG CCGCGCCGCC CGCCACAACC GGGCCCGCAT CGGCGCGGGC GCGGGCGTCG GCGTCAGCGA GCCCGACACC GGTGGCGACC ACGGTGGCGA CCACGGTGGC GACGCTGTCC GCCGCCGACG CCGCCGCCAC GGTGCGCCGG AAGGGCTATG AGCCGGACAT GAGCACCTAC GCGGCCGACC GGCGACTGAA CGTAGTGATC GGCACCGGCC AGCCGGCCGG GGACACCCCC CGGCAGCTCG CCTTCGTCTT CGCCGACGGT GAGTACCGTG GCACGGACAC GAAGGCACCC AGCGCGCGCA TCACCCTCCA GCGCCAGCGC AACGATCATG AGGTCGTGCT GCGCTATGCC ACCTACGACC CGCGGGACCC GGTCGATGCC CCGTCGGGCC ACGCCGACGT CCGCTTCCGC TGGACTGGCA CAATCTTCTC CACCCTGGAC AAGATTCCGC CGAGCGACCC GAATGTCTCC GGCAGCCGAC GGTAG
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Protein sequence | MLTPLTTDDP RRIGPYRLAN RIGAGGMGVV YLGFGTDGRP AAVKVPSAGL ADDPEFRSRF RHEVDAARRV RGSAVAAVLD ADLTGQRPWM ATEYVEGRNL ADAVATRGQL DDRLVQGLAV GLADALVAIH AAGVVHRDLK PANILLTWDG PKVIDFGIAR AGDNTSHTRT GMLIGTLVWM APEQLRGERA GPAADIFAWG ACVTFAAAGR PPFRGERAEA IGLQILTAEP NLDGLPASLV GVVRAALDKE PARRPAATEL LARLVGHDVR SPAESDRASE TALARWWSLP PTPPDGEGPH GGYRDAGYGP DPAHHRASAH HRASAHHRAS APPTVSHGAD GWEDDGWRVG SGRGGSGGGG RRGAVVAVAA LLAVLLSGGL AAALVLNRSD DTPTITGSTP DPLATAGTAA GTAGTAAGTT GPLQAAGTTG PLQAAGTTGP LQAAAPPATT GPASARARAS ASASPTPVAT TVATTVATLS AADAAATVRR KGYEPDMSTY AADRRLNVVI GTGQPAGDTP RQLAFVFADG EYRGTDTKAP SARITLQRQR NDHEVVLRYA TYDPRDPVDA PSGHADVRFR WTGTIFSTLD KIPPSDPNVS GSRR
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