Gene Francci3_2874 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2874 
Symbol 
ID3906005 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp3389367 
End bp3391181 
Gene Length1815 bp 
Protein Length604 aa 
Translation table11 
GC content75% 
IMG OID637880195 
Productserine/threonine protein kinase 
Protein accessionYP_481961 
Protein GI86741561 
COG category[K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms 
COG ID[COG0515] Serine/threonine protein kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.422639 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.298046 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGACGC CCCTGACCAC GGACGATCCC CGACGCATCG GCCCCTACCG GCTGGCGAAC 
CGCATCGGCG CGGGTGGGAT GGGCGTCGTC TACCTCGGTT TCGGCACCGA CGGCAGGCCT
GCGGCCGTGA AGGTGCCGTC GGCCGGACTC GCCGACGATC CCGAGTTCCG GTCCCGTTTC
CGGCACGAGG TCGACGCGGC CCGCCGGGTC AGGGGCAGCG CCGTCGCCGC TGTGCTCGAC
GCCGACCTGA CCGGGCAACG GCCGTGGATG GCCACGGAGT ACGTCGAGGG CAGGAACCTG
GCGGACGCGG TCGCCACCCG CGGCCAGCTC GACGATCGAC TGGTCCAGGG ACTCGCCGTC
GGTCTGGCCG ACGCCCTGGT CGCGATCCAT GCCGCCGGGG TGGTGCACCG CGACCTCAAA
CCGGCGAACA TCCTGCTCAC CTGGGACGGC CCGAAGGTCA TCGACTTCGG CATCGCCCGC
GCCGGGGACA ACACGAGCCA CACCCGGACG GGAATGCTGA TCGGCACCCT GGTCTGGATG
GCGCCCGAGC AGCTGCGCGG CGAGCGGGCC GGACCCGCGG CCGACATCTT CGCCTGGGGG
GCCTGCGTCA CCTTCGCCGC CGCCGGCCGG CCCCCCTTCC GGGGCGAACG GGCGGAGGCG
ATCGGCCTGC AGATCCTCAC CGCGGAGCCC AACCTCGACG GGTTGCCCGC GTCCCTGGTC
GGCGTCGTGC GGGCGGCCCT GGACAAGGAG CCGGCGCGCC GCCCCGCCGC CACCGAGCTG
CTCGCCCGAC TGGTCGGCCA CGACGTCCGC TCCCCCGCCG AATCGGACCG GGCCAGCGAG
ACGGCGCTGG CCCGCTGGTG GTCGTTGCCG CCGACCCCGC CGGACGGCGA GGGTCCCCAC
GGGGGGTACC GCGACGCCGG CTACGGTCCC GATCCCGCCC ACCACCGCGC GTCCGCCCAC
CACCGCGCGT CCGCCCACCA CCGCGCGTCC GCCCCGCCGA CCGTGAGCCA CGGCGCTGAC
GGCTGGGAGG ACGACGGGTG GCGCGTCGGG TCGGGCAGAG GCGGGAGCGG GGGCGGCGGG
CGGCGTGGAG CCGTCGTGGC GGTGGCCGCG CTGCTCGCGG TGCTGCTCAG CGGGGGCCTC
GCGGCGGCCC TGGTGCTCAA CCGTAGCGAC GACACGCCCA CCATCACGGG GTCGACGCCA
GACCCGCTGG CGACGGCGGG GACGGCCGCC GGGACGGCGG GGACGGCCGC CGGGACGACG
GGTCCGTTGC AGGCCGCCGG GACGACGGGT CCGTTGCAGG CCGCCGGGAC GACGGGTCCG
TTGCAGGCCG CCGCGCCGCC CGCCACAACC GGGCCCGCAT CGGCGCGGGC GCGGGCGTCG
GCGTCAGCGA GCCCGACACC GGTGGCGACC ACGGTGGCGA CCACGGTGGC GACGCTGTCC
GCCGCCGACG CCGCCGCCAC GGTGCGCCGG AAGGGCTATG AGCCGGACAT GAGCACCTAC
GCGGCCGACC GGCGACTGAA CGTAGTGATC GGCACCGGCC AGCCGGCCGG GGACACCCCC
CGGCAGCTCG CCTTCGTCTT CGCCGACGGT GAGTACCGTG GCACGGACAC GAAGGCACCC
AGCGCGCGCA TCACCCTCCA GCGCCAGCGC AACGATCATG AGGTCGTGCT GCGCTATGCC
ACCTACGACC CGCGGGACCC GGTCGATGCC CCGTCGGGCC ACGCCGACGT CCGCTTCCGC
TGGACTGGCA CAATCTTCTC CACCCTGGAC AAGATTCCGC CGAGCGACCC GAATGTCTCC
GGCAGCCGAC GGTAG
 
Protein sequence
MLTPLTTDDP RRIGPYRLAN RIGAGGMGVV YLGFGTDGRP AAVKVPSAGL ADDPEFRSRF 
RHEVDAARRV RGSAVAAVLD ADLTGQRPWM ATEYVEGRNL ADAVATRGQL DDRLVQGLAV
GLADALVAIH AAGVVHRDLK PANILLTWDG PKVIDFGIAR AGDNTSHTRT GMLIGTLVWM
APEQLRGERA GPAADIFAWG ACVTFAAAGR PPFRGERAEA IGLQILTAEP NLDGLPASLV
GVVRAALDKE PARRPAATEL LARLVGHDVR SPAESDRASE TALARWWSLP PTPPDGEGPH
GGYRDAGYGP DPAHHRASAH HRASAHHRAS APPTVSHGAD GWEDDGWRVG SGRGGSGGGG
RRGAVVAVAA LLAVLLSGGL AAALVLNRSD DTPTITGSTP DPLATAGTAA GTAGTAAGTT
GPLQAAGTTG PLQAAGTTGP LQAAAPPATT GPASARARAS ASASPTPVAT TVATTVATLS
AADAAATVRR KGYEPDMSTY AADRRLNVVI GTGQPAGDTP RQLAFVFADG EYRGTDTKAP
SARITLQRQR NDHEVVLRYA TYDPRDPVDA PSGHADVRFR WTGTIFSTLD KIPPSDPNVS
GSRR