| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2871 |
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| Symbol | |
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| ID | 3906002 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 3383822 |
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| End bp | 3385513 |
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| Gene Length | 1692 bp |
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| Protein Length | 563 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637880192 |
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| Product | major facilitator transporter |
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| Protein accession | YP_481958 |
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| Protein GI | 86741558 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.175724 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAGACC TGGTGATGCA ACCGATGCCC GGGATGCGGC CGACCCCCGG CACACGACGG
GCCGGCCGCC GGGAATGGGC CGGTCTCGCC GTACTCGCCC TGCCCTGCCT GCTGCTGTCG
ATCGACGTGA CCGTGCTGTA CTTCGCCCTG CCGTTCATCA CCGCACGCCT CGCCCCGAGC
GGCGCCCAAC TGCTCTGGAT CGTCGACATC TACTCCTTCG TGCTCGCCGG CCTGCTGATC
ACGATGGGGA CGGTCGGCGA CCGGATCGGG CGTCGCCGGC TCCTGCTCTA CGGCGCGGCC
GTGTTCGGAA CCGCGTCGGT ACTCGCCGCC TACGCCACCG GCCCGGTCAT GCTGATCCTC
GCCCGGGCGG CGATGGGCGC CGCCGGTGCC ACCCTGATGC CGTCGACCCT CGGGCTCATC
CGGGTCCTGT TCGTCGATCC GGACCAGAGG CGCGTCGCCG TCGCCATCTG GACGGCGAGC
TTCTCCGGCG GTGTCGCGCT GGGACCGCTG CTCGGCGGCT TCCTGCTGGA GCACTTCTGG
TGGGGTGCCG TCTTCCTGAT CAATGTGCCG GTGATGCTCC TGCTGCTGGT GCTGGGTCTC
GCGTTCCTGC CCGAGTTCCG GGATCCGCGT CCCGGCCGCT TCGACCTGAC CAGCGCCGGG
CTCTCCCTCG CCGCCGTCCT CAGCGCGGTC TACGGCATGA AGCGCATCGC CGAACACGGC
TGGACCGCCG TTCCGATGAC CGCCTTCGTC GTCGGTGTGA TCCTGGGTGG CCTCCTTGTG
GTCCGGCAGC GCCGGGTCGA CCAACCGCTG ATCGATCCGC GGTTGTTCGC GTCCCGTGCC
GTGCGCACGG CGTTGGCCGT CAACGCCCTC GCCCTGTTCG CCCTCGTCGG GTTCAGCTTC
TTCGCCACTC AGTACCTGCA GCTCGTGGCG GGCCTGACCC CGCTGGTCGC CGGACTGTGG
ACGATGTTGC CGGCGACCGC AATGATTATC TCTGTGCTGG CCGCCCCCCG GCTGCTGCGG
CTGCTGCGGC TGGGCGGCGC GCTTGGCGCG GGGCTGGTCG TCACCGCGCT GGGATTCGGC
ATCGCCAGTC GGCTCGGCGT CTCCGGGGGT CTGCCGGTGC TGCTCGGCGC CTATGCCGTG
CTGATCAGCG GGGTCGGTGT CGTCCTCACG ATCTGCACCG ACGTCGTGCT CGGCAACGCC
CCACCCGAAC GGGCGGGTTC GGCCTCCGCC CTGTCCGAGT CGGCCATCGA GTTCGGGGGC
GCGCTCGGGG TCGCCGTTCT CGGCAGCATC GCCACCGCCG TCTACCGGAA CGAGGTGCCG
ACGCGGGCAC CGTCCGGCCT GCCCACGATC GCGGTCGACG CGGCGCGGGA GACCCTCGGC
GGTGCGGTGG AGGTCGCCCA CCGGCTCCCC GGCGGCCTCC ACCCGGGTGG TCTTGGCGAC
ATGCTGCTGC GGGTGGCACA GGAATGCTAC GTCGACGCGA TGTCGGTGAC CGCCCTGATT
GCCATGACGG TCATGGCGGT CACGGCCATC GCCGTCGTGG TGGTGCTGCG CCGGGACGCT
GCGCCGTCGA TGCCTGAATC GTCAACGGTC GGATCGTCAA CGGCCGGGGA CGCGGTCGCC
GGGCGGGCCG AGAGCGTCGG CACCGAAGGG TCCGACCGTA CGGTGGCGGA CTCCGCCGCT
CCCGGGGCAT AG
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| Protein sequence | MPDLVMQPMP GMRPTPGTRR AGRREWAGLA VLALPCLLLS IDVTVLYFAL PFITARLAPS
GAQLLWIVDI YSFVLAGLLI TMGTVGDRIG RRRLLLYGAA VFGTASVLAA YATGPVMLIL
ARAAMGAAGA TLMPSTLGLI RVLFVDPDQR RVAVAIWTAS FSGGVALGPL LGGFLLEHFW
WGAVFLINVP VMLLLLVLGL AFLPEFRDPR PGRFDLTSAG LSLAAVLSAV YGMKRIAEHG
WTAVPMTAFV VGVILGGLLV VRQRRVDQPL IDPRLFASRA VRTALAVNAL ALFALVGFSF
FATQYLQLVA GLTPLVAGLW TMLPATAMII SVLAAPRLLR LLRLGGALGA GLVVTALGFG
IASRLGVSGG LPVLLGAYAV LISGVGVVLT ICTDVVLGNA PPERAGSASA LSESAIEFGG
ALGVAVLGSI ATAVYRNEVP TRAPSGLPTI AVDAARETLG GAVEVAHRLP GGLHPGGLGD
MLLRVAQECY VDAMSVTALI AMTVMAVTAI AVVVVLRRDA APSMPESSTV GSSTAGDAVA
GRAESVGTEG SDRTVADSAA PGA
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