Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_2797 |
Symbol | |
ID | 3904943 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 3294721 |
End bp | 3295599 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637880118 |
Product | undecaprenyl pyrophosphate phosphatase |
Protein accession | YP_481884 |
Protein GI | 86741484 |
COG category | [V] Defense mechanisms |
COG ID | [COG1968] Uncharacterized bacitracin resistance protein |
TIGRFAM ID | [TIGR00753] undecaprenyl-diphosphatase UppP |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACTTCT TCGAGGGAAC GGTCCTCGGT CTCGTTCAGG GGCTCACCGA GTTTCTCCCG GTCTCGTCCA GCGCCCACCT GCGCATCGCT GCCGCGCTCG CCGGCTGGGA GGACCCGGGC GCCGCGTTCA CCGCCGTGAC CCAGATCGGC ACCGAGACCG CCGTGCTGAT CTACTTCCGC AGGGACATCG CCCGCATCGT GGCGGCGTGG GCGCGCTCGC TCACCCGCCG GGAGATGCGT AAGGACCCCG ACGCCCGGAC GGGCTGGCTG GTCATCCTCG GCACCCTTCC GATCGGCCTG CTCGGGGTGA CGCTGCAGGA CGCCATCGAG GGTCCGTTCC GCGACCTGCG GCTGATTGCC ACGACGCTGA TCGTGCTCGG CCTGATCCTG GGCGGCGCGG ACTGGTACGC CTCGAAGGGG CGGCCGCAGG GTCGTCATTC GCCGCTCCGC CCGCGCAAGG TGCTTGAGGA CTTGTCGGTG CGTGACGGGC TCCTCTATGG TCTCGCTCAG TCTGCCGCGC TGATCCCCGG CGTCTCCCGG TCCGGTGCGA CGATCAGCGG GGGCCTGCTT CTCGGCTATA CTCGCGAGGC TGCGGCCCGG TACTCCTTCC TGCTGGCGAT GCCGGCGGTG CTGGCGTCCG GGGTCTTCGA GCTGCGTTCC ATCGGTGGGA AGGATGCCGA CGTCGCCTGG GGCCCGACGA TCCTCGCCAC ATTCGTGGCG TTCGTCACCG GCTACGCCGC GATCGCATGG TTCCTGCGGT ACATCTCGAC GCGCAGTTTC GCGCCCTTCG TGCTGTATCG CGTGGGGCTG GGGCTGCTGC TGTTCTCCCT GCTGGTCGGG GGTGCCCTCA GCCCCGACGC CGGTGCCCCC CCGGGCTGA
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Protein sequence | MNFFEGTVLG LVQGLTEFLP VSSSAHLRIA AALAGWEDPG AAFTAVTQIG TETAVLIYFR RDIARIVAAW ARSLTRREMR KDPDARTGWL VILGTLPIGL LGVTLQDAIE GPFRDLRLIA TTLIVLGLIL GGADWYASKG RPQGRHSPLR PRKVLEDLSV RDGLLYGLAQ SAALIPGVSR SGATISGGLL LGYTREAAAR YSFLLAMPAV LASGVFELRS IGGKDADVAW GPTILATFVA FVTGYAAIAW FLRYISTRSF APFVLYRVGL GLLLFSLLVG GALSPDAGAP PG
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