Gene Francci3_2797 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2797 
Symbol 
ID3904943 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp3294721 
End bp3295599 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content70% 
IMG OID637880118 
Productundecaprenyl pyrophosphate phosphatase 
Protein accessionYP_481884 
Protein GI86741484 
COG category[V] Defense mechanisms 
COG ID[COG1968] Uncharacterized bacitracin resistance protein 
TIGRFAM ID[TIGR00753] undecaprenyl-diphosphatase UppP 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTTCT TCGAGGGAAC GGTCCTCGGT CTCGTTCAGG GGCTCACCGA GTTTCTCCCG 
GTCTCGTCCA GCGCCCACCT GCGCATCGCT GCCGCGCTCG CCGGCTGGGA GGACCCGGGC
GCCGCGTTCA CCGCCGTGAC CCAGATCGGC ACCGAGACCG CCGTGCTGAT CTACTTCCGC
AGGGACATCG CCCGCATCGT GGCGGCGTGG GCGCGCTCGC TCACCCGCCG GGAGATGCGT
AAGGACCCCG ACGCCCGGAC GGGCTGGCTG GTCATCCTCG GCACCCTTCC GATCGGCCTG
CTCGGGGTGA CGCTGCAGGA CGCCATCGAG GGTCCGTTCC GCGACCTGCG GCTGATTGCC
ACGACGCTGA TCGTGCTCGG CCTGATCCTG GGCGGCGCGG ACTGGTACGC CTCGAAGGGG
CGGCCGCAGG GTCGTCATTC GCCGCTCCGC CCGCGCAAGG TGCTTGAGGA CTTGTCGGTG
CGTGACGGGC TCCTCTATGG TCTCGCTCAG TCTGCCGCGC TGATCCCCGG CGTCTCCCGG
TCCGGTGCGA CGATCAGCGG GGGCCTGCTT CTCGGCTATA CTCGCGAGGC TGCGGCCCGG
TACTCCTTCC TGCTGGCGAT GCCGGCGGTG CTGGCGTCCG GGGTCTTCGA GCTGCGTTCC
ATCGGTGGGA AGGATGCCGA CGTCGCCTGG GGCCCGACGA TCCTCGCCAC ATTCGTGGCG
TTCGTCACCG GCTACGCCGC GATCGCATGG TTCCTGCGGT ACATCTCGAC GCGCAGTTTC
GCGCCCTTCG TGCTGTATCG CGTGGGGCTG GGGCTGCTGC TGTTCTCCCT GCTGGTCGGG
GGTGCCCTCA GCCCCGACGC CGGTGCCCCC CCGGGCTGA
 
Protein sequence
MNFFEGTVLG LVQGLTEFLP VSSSAHLRIA AALAGWEDPG AAFTAVTQIG TETAVLIYFR 
RDIARIVAAW ARSLTRREMR KDPDARTGWL VILGTLPIGL LGVTLQDAIE GPFRDLRLIA
TTLIVLGLIL GGADWYASKG RPQGRHSPLR PRKVLEDLSV RDGLLYGLAQ SAALIPGVSR
SGATISGGLL LGYTREAAAR YSFLLAMPAV LASGVFELRS IGGKDADVAW GPTILATFVA
FVTGYAAIAW FLRYISTRSF APFVLYRVGL GLLLFSLLVG GALSPDAGAP PG