| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2767 |
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| Symbol | |
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| ID | 3906478 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 3261053 |
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| End bp | 3262720 |
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| Gene Length | 1668 bp |
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| Protein Length | 555 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637880090 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_481856 |
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| Protein GI | 86741456 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.26917 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGCC CACGTCCCCG ATTCCACCCC GCCGTCCGCG TCGCGGCCGT CGCGGCCGCC
GCCGCCATGC TCGGCGCCTG CGCGTCCGAT CCGGCACCCG CCGGCTCCAC CAGCGCGAAC
GGGGCGGGCG GAACACCGCA CCGGGGCGGC ACGCTCACCT TCGCGGTGGC CACCGAGGGC
GACTGCCTCG ACCCGCACGT CAGCCCGGCC GACGTCACCG CCGTCATCCA GCGGGGTGTG
TTCGACTCGC TCGTGACGCA GCAGCCGGGC GGCGGGGTCG GCCCGTGGCT GGCCACGTCG
TGGACGGTCT CAGCCGACGC GAAGACGTTC ACCTTCAAGC TCAAGGACGG CGTGACGTTC
CACGACGGCA CACCGTTCGA CGCGGCGGCG GTGAAGGCGA ACTTCGACCA CATCGCGGCG
AAGTCAACGA AGTCGCAGTA CGCGGTGGCG CTGCTCGGCC CCTACGTCGG CACCGAGGTC
GTCGACCCGC ACACGGCCAA GGTCACCTTC TCCAAGCCGT ACGCGGCATT CCTCGCCGCG
GCCGCCACGA CCTACCTCGG CATCGAGTCG TCGAAGAAGA TCGCCGACGC GCCGGACACC
CTCTGCTCGG GCGGGCCGAA CTCGGTGGGT ACCGGGCCGT TTCGCTTCAC CCGTTATGTG
AAGGGATCGG TCGCCGAGTT CACCCGCAAC GACGGCTACA CCTCGGCCCC CGGCGGCGCG
AAGCACACCG GCGCCGCCTA CCTCGACAAG CTGGCCATCC GCTTCCTGCC CGAGGACGCG
ACGAGGGTGA GCGCGCTGCG CAGTGGGGAG ATCGACGCCG CCGACGGCGT GCCGGCGCAG
AACGTCGCCG CGATCGAGGG CGATACCTCC CTGCGGCTAC TCAAGGTGAT TCCGCAGAAC
GCCAACTACT CGATCTACTT CAACACCAGG CGTGCGCCGT TCTCCGACGA GCGGGTCCGT
AAGGCCGTCC AGCGCGCCGT CGACGTCGAC ACGATCGTGA AGACGGTCTA CGCCGGCCAG
TACGCCCGCG CGTGGAGCAC GCTGACGCCA AAGAACATCG CCTACGATCG CAGCCTCGAG
AAGGCCTTCC CCCATGACGT CACCGCGGCG AACAAGCTAC TCGACGAGGC CGGCTACACC
GGCCGCGACG CCGACGGCTA CCGCACGAAG AACGGCGCGC GTCTCGTCCT CGACTGGCCC
TACGTCGGCG CCTTCAACCG CGAGCAGCGC GACATCGTCA GCCAGGCGGT ACAGGCCGAC
CTGAAGAAGG TCGGCATCGC CACCAAGCTC TACTCGATGG ACTCGGGCGC CTACACCACC
CAGCGCAACG CCGGCGGCTA CGACCTGATC GCCTACAGCT GGGGCAAGTC CGACCCCGAC
CTGCTCCGTA CACTGTTCGC CTCGAATCTG GCGTTCACCC AGGGCGGGGC GAACAGTTCC
GGGATCGCGG TGCCGGAGGT CGACGACTGG CTCGCGACCG GCGCCGGCAC GACGGATCTC
GCCGCCCGCA AGAAGGCCTA CGGGCAGGTG CAGAAATATG TGATCGACCA CGCGTACACC
CTGCCGATCT ACGTGTTCAC CCGGACCGTC GGCACGGCGT CGAAGGTCCA CGACATCACC
TTCGACGCGG ACGCCTTCCC GCTGTTCTAC GACAGCTGGG TGGGCTGA
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| Protein sequence | MKRPRPRFHP AVRVAAVAAA AAMLGACASD PAPAGSTSAN GAGGTPHRGG TLTFAVATEG
DCLDPHVSPA DVTAVIQRGV FDSLVTQQPG GGVGPWLATS WTVSADAKTF TFKLKDGVTF
HDGTPFDAAA VKANFDHIAA KSTKSQYAVA LLGPYVGTEV VDPHTAKVTF SKPYAAFLAA
AATTYLGIES SKKIADAPDT LCSGGPNSVG TGPFRFTRYV KGSVAEFTRN DGYTSAPGGA
KHTGAAYLDK LAIRFLPEDA TRVSALRSGE IDAADGVPAQ NVAAIEGDTS LRLLKVIPQN
ANYSIYFNTR RAPFSDERVR KAVQRAVDVD TIVKTVYAGQ YARAWSTLTP KNIAYDRSLE
KAFPHDVTAA NKLLDEAGYT GRDADGYRTK NGARLVLDWP YVGAFNREQR DIVSQAVQAD
LKKVGIATKL YSMDSGAYTT QRNAGGYDLI AYSWGKSDPD LLRTLFASNL AFTQGGANSS
GIAVPEVDDW LATGAGTTDL AARKKAYGQV QKYVIDHAYT LPIYVFTRTV GTASKVHDIT
FDADAFPLFY DSWVG
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