| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2752 |
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| Symbol | |
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| ID | 3906463 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 3242445 |
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| End bp | 3243941 |
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| Gene Length | 1497 bp |
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| Protein Length | 498 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637880075 |
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| Product | major facilitator transporter |
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| Protein accession | YP_481841 |
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| Protein GI | 86741441 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGAGGT CCGCTCAGCC GAAGGAGTCT GCGGCATCAC CACTGCTGCT GCCGGTCGTG
TGCCTCGGCC AGTTCCTGGT CGTGTTCAGC CTGTCCAGCG TGAATGTCGC GCTGCCCAGC
CTGGCAGCCG ATCTTCAGAT GAGCCGCGAG ACCCAGCCCT ACACGGTCAC GGCCTACGGG
ATAGCCCTGG GCAGCCTGCT CCTGCTGGGT GGCAGGGCTG GCGATCTACT CGGCCGACGG
CGACTGTTCC GGCTAGGCAC GGGGGTCTTC GCGGTCGGCA CCGTGGTGTG CACGCTCGCC
AACGTGACCG GCGTGCTGCT CGCTGGGCGG GCCCTGGAGG GGCTCGGTGC GGCCATGCTC
GCCCCGGCCG CGCTGGGGAC GATCAACGCG ATCTACCCGC AAGGGCCGAG CAGAAACAAG
GCGCTCGGGG TGTTCGGTGC GGTGTCCAGC GCGGCGGCCG GGGTGGGCGT CTTGGCGGGC
GGGGTCCTCA CCGACGGGCC GGGATGGCGG TGGGCGTTCG CGATCAAAAT TCCCTTCTGT
CTACTCCTGC TCGCCGTGGT CGGAAGGATC ATGCCGGAAA CCCGTGACAC CCGTTCTCAC
CACGGCTTCG ACATCGCCGG CGCGCTCACC GCGACGGGGT CGATGTTCTC GCTGGTCGTG
GCCATCACAC AGGCGGAGCA GCGCGGTTTC ACCAGCCCGG CGATCCTTGC TCTGTTCGGA
TCAGCCGCCG TTCTTCTGAT CGCCTTCATC GTGATCGAGA GCCGCAGCGA CGACCCGCTC
ATGCCGTTGG CCCTCTTCCG CCGGCGTGGT CTCAGCGTCG CCAACGGCGC GACCCTGCTC
GTGTGGGCCA GCTTCGGGTC GGCTTTCCTC CTGGTGGCCC TGTATGTGCA GCAGGTACTC
GGCTACAGCC CGATGAAGGC CGGGCTGACA TTCGTGCCGA TGGCAACCGC GGCCGCGCTC
GCGGCCAACG TCGCCCAGGC GACAGCGAGT CGTTCCGCGC GCGGTCCCAA GCCCGCGCTG
CTCGTCGGCC TTGTCCTCCT CACTGTCGGC GTGGCCCTCC TGTCCCGGGG CGACGCCGAC
ACCAGGTACA CGGCGGTGCT GCTGCCGGCG CTCGTGCTGT GCGGCGCCGG TCTCGCGACC
TCCCTCACCG CGCTCAACGT GGCCGCCTTC AGCGGCTCCA ACAGCGACGA CTCCGGGGTT
GAGGCAGGAC TCCTGAGCAC CTCCCAGGAG ATCGGCGCGG CCCTCGGCGT CTCGATTCTC
TCGACGGTGT CGGCCCGCGT CATCTCCGAT CATCTCGCAG CTCATCCCGG AGATCCGACC
GCGATGCTCA GCGGCACGGT CGATGCCTTT CAGGTGTCCT TCGTCGTCGC GGCGGGCATG
GCTGCCGGCG CCTTCCTGCT TTCCCTGATC GCCCTCTCGA CGCGGGTTGA TATCCCCCCG
GCCAGCGTGT CGGAAAACCC CCTCGCGGAA CCAGCCTCGA TAATGCCCTC AAGGTGA
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| Protein sequence | MSRSAQPKES AASPLLLPVV CLGQFLVVFS LSSVNVALPS LAADLQMSRE TQPYTVTAYG
IALGSLLLLG GRAGDLLGRR RLFRLGTGVF AVGTVVCTLA NVTGVLLAGR ALEGLGAAML
APAALGTINA IYPQGPSRNK ALGVFGAVSS AAAGVGVLAG GVLTDGPGWR WAFAIKIPFC
LLLLAVVGRI MPETRDTRSH HGFDIAGALT ATGSMFSLVV AITQAEQRGF TSPAILALFG
SAAVLLIAFI VIESRSDDPL MPLALFRRRG LSVANGATLL VWASFGSAFL LVALYVQQVL
GYSPMKAGLT FVPMATAAAL AANVAQATAS RSARGPKPAL LVGLVLLTVG VALLSRGDAD
TRYTAVLLPA LVLCGAGLAT SLTALNVAAF SGSNSDDSGV EAGLLSTSQE IGAALGVSIL
STVSARVISD HLAAHPGDPT AMLSGTVDAF QVSFVVAAGM AAGAFLLSLI ALSTRVDIPP
ASVSENPLAE PASIMPSR
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