Gene Francci3_2708 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2708 
Symbol 
ID3904698 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp3193246 
End bp3194436 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content72% 
IMG OID637880032 
Producttransposase, IS4 
Protein accessionYP_481798 
Protein GI86741398 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCTGTGG GGGCATTGTC GCGTGACGCG GCCGGTGTGG TGGGAGCCGG CGCGGTGTCG 
CGTGAGGGAA TCTGGCAGCG GCTGCACGCG ATGGGCGAGC ACCGGGGCCG ACGTGGGCGG
GTCTACCCGC TGGCGGTGCT GGCGGCGGTG TGGCTGTGCG CGCTGACCGC GGCGGGCCAT
GACCGGGTCA CCGCCGTGAT CGAATGGCTC GCCGGCACCA CGGAGGAGGA ACGGCGCCGG
CTGCGGCTGC CGTACGACCC GTTTGACGGC TACCGGCTGC CGAGCGAGTC GACGATCCGC
CGGTTCCTCA ACGACACCGA CGACGCGCGG CTCGCCCGCG CACTGCTCGA TCCGCCGCTG
GCCGACCCGG CCCCGCCGAA GCCGGCGTCA CCCGAGGCGG CGGGAGAAGC GGTGCGGGCG
GTCTACGCAC TGGATGGGAA GACCAGCCGC GGCGCGAAGC GCGCCGACGG GCGGCAGGTC
CAACTGGTCG GGGTCGCCGA CCAGGCGACC GGCCGGCTGG TCAACCAGCA CGAGGTGGAC
TCGAAGAGCA ATGAGACGAA GGCGTTCCGC CCTGTCCTCG AGCCCCTCGA CCTTGCCTGC
GACCTGTTGA CCTTCGACGC TCTGCATACC GTGCGCGACC ATCTCGACTG GCTGGTCACC
GACAAGAAGG CCCATTACCT TGCGGTCGTG AAGGGCAACC AGCCAACGCT GCGCGCGTTC
CTGGCCGCGT TGCCGTGGGC GGACGTCCCG GTCGCCGACA CCACCCACGA CCATGGCCAC
GGCCGTGACG AGACCCGCAC GCTGAAGGCC GCGACCGTCG AGCACGCCGA GTTCCCGCAC
GCCCGCCAGG CCGTCCGGAT CCAGCGCTGG CGCCGGGAGA AGGGCAGGAA ACCCAGCCGG
GAGACGGTCT ACGGCATCAC GGATCTGGCC TTCGAGCAGG CCTCGGCCGG GTTCCTCGCC
GACGCCGCCC GCGGCCAGTG GATCATCGAG AACCGTCAGC ACCACGTCCG TGACGTCACT
TTCGGTGAGG ACGCGAGCCG GAGCCGGACC CGCCGCGGCC CGGCCAACCT CGCGATCTTC
CGCGCCACTG TCGCGCACGC GGTCCGCGCC GCGGGCCACC GCTACGTTCC GGCCGGGCGC
CGGGCCTGCA AGACCGCCAC CGCCGCGCTC GACCTGCACG GCTTTCCCTG A
 
Protein sequence
MPVGALSRDA AGVVGAGAVS REGIWQRLHA MGEHRGRRGR VYPLAVLAAV WLCALTAAGH 
DRVTAVIEWL AGTTEEERRR LRLPYDPFDG YRLPSESTIR RFLNDTDDAR LARALLDPPL
ADPAPPKPAS PEAAGEAVRA VYALDGKTSR GAKRADGRQV QLVGVADQAT GRLVNQHEVD
SKSNETKAFR PVLEPLDLAC DLLTFDALHT VRDHLDWLVT DKKAHYLAVV KGNQPTLRAF
LAALPWADVP VADTTHDHGH GRDETRTLKA ATVEHAEFPH ARQAVRIQRW RREKGRKPSR
ETVYGITDLA FEQASAGFLA DAARGQWIIE NRQHHVRDVT FGEDASRSRT RRGPANLAIF
RATVAHAVRA AGHRYVPAGR RACKTATAAL DLHGFP