Gene Francci3_2702 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2702 
Symbol 
ID3904692 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp3186594 
End bp3187442 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content69% 
IMG OID637880026 
ProductXRE family transcriptional regulator 
Protein accessionYP_481792 
Protein GI86741392 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTCGGC GTCCACCGTC GGCGCGTGCC CGTGGGCTCG GCGCTGAACT TCGCGACCTG 
CGTCTCGGCC TCGGGAAGAC CAGCCGCGCT GTAGCCGAAG GCTTGGGGTG GTCTCCCAGC
ACACTTAGCC GGCTGGAGAA CGGCCTACGC GGCATCACGG TCGAAGACGT CGCGGCGCTG
CTGGTCGTCT ACCAGGTCAC CGGTCCGGAG CGAGATCGCC TCCTCGCGCT GGCGCGGGAA
GTCGACAGGC CCGGCTGGTG GGAGACCGGC CTGCCGGGAC TGCCCAACCA GCTCACGGCG
CTCATCGGCT TCGAGTCGCA GGCCGAGAGG ATCACCGAGG TGGGCATGCT GCTTGTGCCC
GGCCTGCTCC AGACCACGGA GTACGCCCGC GCCGTCATGG TCGGCGGAGA CGTCCCCGCC
CACGAGATCG AAGCGCGGGT GGTTACCCGA CTCGGCCGGC AAGCGCTCCT GAGTCGCGCA
GACCCGCCCG AGCTGCATGT GATCATTGAC GAGTCCGTTC TACGCCGCCC GGTCGGCGGC
CCCGCCGTGA TGGCCGCGCA GCTACAGCAC ATCCTCACCG CGGCATCCCG GCCCACGATC
ACCGTGCAGG TTCTCCTCAG CGCACTCGGG GCGCATCTCG GCACCGCCGG GTCGTTCGTG
CTACTGGAGT TCCTCAAGGC GCACGCCATC GTCCACCTCG AACACCTACG CTCCAGCCTG
TTCGTCGACG AACCCGGCGA CGTCGCCCCG TTCATGCAGG CCCGGGATAC GCTGGCACAA
CAGGCTCTTG ACCCCACCGC ATCAGCGGAC CTGCTGGCAT CCGTCGCAGA CGAGTACCAA
GGGAGGTGA
 
Protein sequence
MPRRPPSARA RGLGAELRDL RLGLGKTSRA VAEGLGWSPS TLSRLENGLR GITVEDVAAL 
LVVYQVTGPE RDRLLALARE VDRPGWWETG LPGLPNQLTA LIGFESQAER ITEVGMLLVP
GLLQTTEYAR AVMVGGDVPA HEIEARVVTR LGRQALLSRA DPPELHVIID ESVLRRPVGG
PAVMAAQLQH ILTAASRPTI TVQVLLSALG AHLGTAGSFV LLEFLKAHAI VHLEHLRSSL
FVDEPGDVAP FMQARDTLAQ QALDPTASAD LLASVADEYQ GR