Gene Francci3_2661 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2661 
Symbol 
ID3904885 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp3141971 
End bp3142492 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content74% 
IMG OID637879986 
Productferric uptake regulator family protein 
Protein accessionYP_481752 
Protein GI86741352 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0735] Fe2+/Zn2+ uptake regulation proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.946961 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0414019 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGGACA CCTGGATCGT GAAGGACAGT CAGACGGATC GTGACGGCCG GCGTGGCGAT 
CCGTCCGCCG CCGGGATCGC CGCGTTGCGC GCCCGCGGGG AGCGGGTTAC CCCGGCCCGC
CGGGCGGTGC TCCAGGTACT CGCCGGCACG AGCGAGCACC TGTCCGTTGA CGACGTCTTC
GCCCGGGCGG AGACGATCGT CCCGGGCATG CACCGCACCA CCGTCTATCG CGCGGTGGAG
ACCCTCGGCG ACCTCGGCCT GGTCACCCAC GTCCACCCCG ACCACGGGCC GGCCGTCTAC
CACCTGGCGG CGGCCCTCAC CGGCGGCGCC CACCTGCACG TCCGGTGCCG CTCCTGCGGC
ACGATCCTCG ACGTGCCCGC GGACCTGCTC GACGACGTCG CGCGTCGGCT CGCCACCACC
GTCGGGTTCA CCCTGCAGCC CGACCACGCC GCCCTTGCCG GTCGGTGCCG CGCCTGTTCG
GTGACGTCCC CGTCCGTGGA CGGGGACCTC GCACCCGCAT GA
 
Protein sequence
MKDTWIVKDS QTDRDGRRGD PSAAGIAALR ARGERVTPAR RAVLQVLAGT SEHLSVDDVF 
ARAETIVPGM HRTTVYRAVE TLGDLGLVTH VHPDHGPAVY HLAAALTGGA HLHVRCRSCG
TILDVPADLL DDVARRLATT VGFTLQPDHA ALAGRCRACS VTSPSVDGDL APA