Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_2661 |
Symbol | |
ID | 3904885 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 3141971 |
End bp | 3142492 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 637879986 |
Product | ferric uptake regulator family protein |
Protein accession | YP_481752 |
Protein GI | 86741352 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0735] Fe2+/Zn2+ uptake regulation proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.946961 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0414019 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAGGACA CCTGGATCGT GAAGGACAGT CAGACGGATC GTGACGGCCG GCGTGGCGAT CCGTCCGCCG CCGGGATCGC CGCGTTGCGC GCCCGCGGGG AGCGGGTTAC CCCGGCCCGC CGGGCGGTGC TCCAGGTACT CGCCGGCACG AGCGAGCACC TGTCCGTTGA CGACGTCTTC GCCCGGGCGG AGACGATCGT CCCGGGCATG CACCGCACCA CCGTCTATCG CGCGGTGGAG ACCCTCGGCG ACCTCGGCCT GGTCACCCAC GTCCACCCCG ACCACGGGCC GGCCGTCTAC CACCTGGCGG CGGCCCTCAC CGGCGGCGCC CACCTGCACG TCCGGTGCCG CTCCTGCGGC ACGATCCTCG ACGTGCCCGC GGACCTGCTC GACGACGTCG CGCGTCGGCT CGCCACCACC GTCGGGTTCA CCCTGCAGCC CGACCACGCC GCCCTTGCCG GTCGGTGCCG CGCCTGTTCG GTGACGTCCC CGTCCGTGGA CGGGGACCTC GCACCCGCAT GA
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Protein sequence | MKDTWIVKDS QTDRDGRRGD PSAAGIAALR ARGERVTPAR RAVLQVLAGT SEHLSVDDVF ARAETIVPGM HRTTVYRAVE TLGDLGLVTH VHPDHGPAVY HLAAALTGGA HLHVRCRSCG TILDVPADLL DDVARRLATT VGFTLQPDHA ALAGRCRACS VTSPSVDGDL APA
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