| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2660 |
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| Symbol | |
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| ID | 3906333 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 3141254 |
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| End bp | 3141946 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 637879985 |
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| Product | peptide deformylase |
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| Protein accession | YP_481751 |
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| Protein GI | 86741351 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
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| TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.729564 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0430884 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGTGC TCCCGATCCG CACCGTTGGT GATCCCGTTC TGCGCACTCC GACCACGCTG
GTCACGGAGT TCGACACTGC GCTCGGTCGG CTGGTCACCG ACATGATCGA CACCATGTAC
GACGCGCCCG GGGTGGGGCT TGCCGCCCCG CAGATCGGGG TCGGGCTGCG CCTGTTCGTC
TTCGACGTCG ACTACGACCC GCGTGACGAG TCGGTACCAC GGGTGCCGCG GGTGGTGGTG
AACCCGGTGC TGGAACTCGG CCCGGACCCG GGGCGGCCCG GGGAGACCCA GCGGCCTGGC
GGGATCCAGC GGTCCGGGGA GACCCAGCGG TCCGGGGAGA CCCAGCGGTC CGGGGAGACC
CAGCGGTCCG GGGAGACCCA GCAGCACGGC CCGGAGGGAT GCCTGTCCGT CCCGGGGCTG
CACTTCCCGA CCACGCGGGC GCTGGCCGCG CGGGTCCGCG GGGTGGACGT TACGGGGCAG
CCGGTCGAGT ACGCCGGCGA GGGCCTGCTT GCGCGCTGCT TCCAGCACGA GGTCGACCAT
CTCGACGGGA TCCTCTACGT CGACCGGCTG ACCGGGGAGG CGCGCCGTGC CGCCGTCCAG
GCACTGCGCG AGCCGCCGCC GACCCCGGAG CAGGCACGGG CGGCCGGCGA GTACCTGCGG
TCGCTGCGCC GGTCAGCCGG GTCGGTCCGG TGA
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| Protein sequence | MTVLPIRTVG DPVLRTPTTL VTEFDTALGR LVTDMIDTMY DAPGVGLAAP QIGVGLRLFV
FDVDYDPRDE SVPRVPRVVV NPVLELGPDP GRPGETQRPG GIQRSGETQR SGETQRSGET
QRSGETQQHG PEGCLSVPGL HFPTTRALAA RVRGVDVTGQ PVEYAGEGLL ARCFQHEVDH
LDGILYVDRL TGEARRAAVQ ALREPPPTPE QARAAGEYLR SLRRSAGSVR
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