Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_2635 |
Symbol | |
ID | 3906308 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 3109620 |
End bp | 3110957 |
Gene Length | 1338 bp |
Protein Length | 445 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637879960 |
Product | ABC transporter related |
Protein accession | YP_481726 |
Protein GI | 86741326 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.182564 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.318501 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCCGAC GGACCGGATC GTCCCGAGGC GGGAAGCGGG GCGCGGTCGC GGGCAGCCCG CCCGGCCGAG AGGACCGCGG GTCGCGGCCC GGCGAGTACG GTGCCGGCCG TGACGGCCGG GTTCCCGAGC ACCCGGGCGG CCGGCGAGAA GACGGACCGG ACGCCGCACC CGCGGCCCGC GCCGCCAGGC TGACGAAGGT CTACGGCTCC GGTGACACCA CCGTCACGGC ACTGCGCGAG ATCGACCTGG CCTTCCCCCG CGGCCGATTC ACTGCGATCA TGGGGCCGTC CGGGTCGGGG AAGTCGACGC TGATGCACTG CCTGGCCGGG TTGGACACGG TCACCCGGGG ACGGGTCTTC ATCGGCAACG TGGACCTGTC CCGGCTGTCC GACAAGCAAC TGACCCGGTT GCGTCGCGAC CGCATCGGGT TCATCTTCCA GCAGTTCAAC CTGCTGCCCA CGCTGACCGC GGCCGAGAAC ATCACGCTGC CGTTGAGCAT CGCCGGGCGT TCGCCGGATC GGGCCTGGAT GCGCACCGTC ATCGACGCGG TCGGTCTCGC ACCGCGGTTG AAGCACCGGC CGAGCGAACT CTCGGGCGGT CAGCAGCAAC GGGTCGCCTG TGCGCGGGCC CTGGTCACCC GGCCGGAGAT CATCTTCGCC GACGAGCCGA CCGGCAACCT TGACTCCCGG TCGGGAGCCG AGGTGCTGTC GTTCCTGCGT GACTCGGTCT CCGAACTCGG GCAGACGATC GTCATGGTCA CCCACGACGC GACGGCGGCG TCCTACTCGG ATGAAGTGAT CTTCCTTGCC GACGGTCGAC TCGTTGACGC GATCGCGAAC CCGACCGCGG AGGAGGTGCT GGACCGGATG AAGCACCTCG ACGCCGCCGC GGGCGGCTTG GCGGCCGACG GCGAGATCGC CGACGACCGG GACGACCATA ACGACACCGA CGGTCGCTAC GGGCCTGCCG GTGACTACGA CGACTACGCC TACCCGGACC AGGCCTACCC GGACCAGGCC TACCCGGACC AGGCCTACCC GGACCAGCCG ACCTACGGGC GAGACGAGCA CGATCCCTAC CAGGGCCACT ACCCGGAGCG GCGCACCGGC CAGTTCGAGG CGATCCCCGC CCCGGACCTC GGGCCCGACG CCGGTGGGCA GCCGGCGTCA AGGCGGGTCG GCGGCACGCG CCACGGCGAG GAGTACTACT CCGGCCGCTC CCACCACCGG CCGGTGCCGA GGCCTGGCGG CGGGCCTCCG CTCACCGACC CCGGCCGTGT CGACGGCGGG GGGGACAGTT ACCACCCGGA CGGCACGGAG CCGGCGGGCT GGGCCTGA
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Protein sequence | MARRTGSSRG GKRGAVAGSP PGREDRGSRP GEYGAGRDGR VPEHPGGRRE DGPDAAPAAR AARLTKVYGS GDTTVTALRE IDLAFPRGRF TAIMGPSGSG KSTLMHCLAG LDTVTRGRVF IGNVDLSRLS DKQLTRLRRD RIGFIFQQFN LLPTLTAAEN ITLPLSIAGR SPDRAWMRTV IDAVGLAPRL KHRPSELSGG QQQRVACARA LVTRPEIIFA DEPTGNLDSR SGAEVLSFLR DSVSELGQTI VMVTHDATAA SYSDEVIFLA DGRLVDAIAN PTAEEVLDRM KHLDAAAGGL AADGEIADDR DDHNDTDGRY GPAGDYDDYA YPDQAYPDQA YPDQAYPDQP TYGRDEHDPY QGHYPERRTG QFEAIPAPDL GPDAGGQPAS RRVGGTRHGE EYYSGRSHHR PVPRPGGGPP LTDPGRVDGG GDSYHPDGTE PAGWA
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