Gene Francci3_2635 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2635 
Symbol 
ID3906308 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp3109620 
End bp3110957 
Gene Length1338 bp 
Protein Length445 aa 
Translation table11 
GC content72% 
IMG OID637879960 
ProductABC transporter related 
Protein accessionYP_481726 
Protein GI86741326 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.182564 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.318501 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCGAC GGACCGGATC GTCCCGAGGC GGGAAGCGGG GCGCGGTCGC GGGCAGCCCG 
CCCGGCCGAG AGGACCGCGG GTCGCGGCCC GGCGAGTACG GTGCCGGCCG TGACGGCCGG
GTTCCCGAGC ACCCGGGCGG CCGGCGAGAA GACGGACCGG ACGCCGCACC CGCGGCCCGC
GCCGCCAGGC TGACGAAGGT CTACGGCTCC GGTGACACCA CCGTCACGGC ACTGCGCGAG
ATCGACCTGG CCTTCCCCCG CGGCCGATTC ACTGCGATCA TGGGGCCGTC CGGGTCGGGG
AAGTCGACGC TGATGCACTG CCTGGCCGGG TTGGACACGG TCACCCGGGG ACGGGTCTTC
ATCGGCAACG TGGACCTGTC CCGGCTGTCC GACAAGCAAC TGACCCGGTT GCGTCGCGAC
CGCATCGGGT TCATCTTCCA GCAGTTCAAC CTGCTGCCCA CGCTGACCGC GGCCGAGAAC
ATCACGCTGC CGTTGAGCAT CGCCGGGCGT TCGCCGGATC GGGCCTGGAT GCGCACCGTC
ATCGACGCGG TCGGTCTCGC ACCGCGGTTG AAGCACCGGC CGAGCGAACT CTCGGGCGGT
CAGCAGCAAC GGGTCGCCTG TGCGCGGGCC CTGGTCACCC GGCCGGAGAT CATCTTCGCC
GACGAGCCGA CCGGCAACCT TGACTCCCGG TCGGGAGCCG AGGTGCTGTC GTTCCTGCGT
GACTCGGTCT CCGAACTCGG GCAGACGATC GTCATGGTCA CCCACGACGC GACGGCGGCG
TCCTACTCGG ATGAAGTGAT CTTCCTTGCC GACGGTCGAC TCGTTGACGC GATCGCGAAC
CCGACCGCGG AGGAGGTGCT GGACCGGATG AAGCACCTCG ACGCCGCCGC GGGCGGCTTG
GCGGCCGACG GCGAGATCGC CGACGACCGG GACGACCATA ACGACACCGA CGGTCGCTAC
GGGCCTGCCG GTGACTACGA CGACTACGCC TACCCGGACC AGGCCTACCC GGACCAGGCC
TACCCGGACC AGGCCTACCC GGACCAGCCG ACCTACGGGC GAGACGAGCA CGATCCCTAC
CAGGGCCACT ACCCGGAGCG GCGCACCGGC CAGTTCGAGG CGATCCCCGC CCCGGACCTC
GGGCCCGACG CCGGTGGGCA GCCGGCGTCA AGGCGGGTCG GCGGCACGCG CCACGGCGAG
GAGTACTACT CCGGCCGCTC CCACCACCGG CCGGTGCCGA GGCCTGGCGG CGGGCCTCCG
CTCACCGACC CCGGCCGTGT CGACGGCGGG GGGGACAGTT ACCACCCGGA CGGCACGGAG
CCGGCGGGCT GGGCCTGA
 
Protein sequence
MARRTGSSRG GKRGAVAGSP PGREDRGSRP GEYGAGRDGR VPEHPGGRRE DGPDAAPAAR 
AARLTKVYGS GDTTVTALRE IDLAFPRGRF TAIMGPSGSG KSTLMHCLAG LDTVTRGRVF
IGNVDLSRLS DKQLTRLRRD RIGFIFQQFN LLPTLTAAEN ITLPLSIAGR SPDRAWMRTV
IDAVGLAPRL KHRPSELSGG QQQRVACARA LVTRPEIIFA DEPTGNLDSR SGAEVLSFLR
DSVSELGQTI VMVTHDATAA SYSDEVIFLA DGRLVDAIAN PTAEEVLDRM KHLDAAAGGL
AADGEIADDR DDHNDTDGRY GPAGDYDDYA YPDQAYPDQA YPDQAYPDQP TYGRDEHDPY
QGHYPERRTG QFEAIPAPDL GPDAGGQPAS RRVGGTRHGE EYYSGRSHHR PVPRPGGGPP
LTDPGRVDGG GDSYHPDGTE PAGWA