Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_2617 |
Symbol | |
ID | 3906523 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 3091097 |
End bp | 3091501 |
Gene Length | 405 bp |
Protein Length | 134 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637879942 |
Product | nucleic acid binding protein |
Protein accession | YP_481708 |
Protein GI | 86741308 |
COG category | [R] General function prediction only |
COG ID | [COG1487] Predicted nucleic acid-binding protein, contains PIN domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.243477 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCAGCCCG TCGTCCTTGA CACCGACATC GCCTCCCTGA GTCACAAGCG CAGGCTCAGC AGGCCCGTGG CAACCCACCT GATCGGCCGC CGGCCGCTGA TCACCTTCGT GACCTTCGGT GAGCTCACCA AGTGGACCGA TCCGCGAGAC TGGGGTAGTC GTCGACGTCA GGAACTCGCC GACTGGCTTT CGGGAATCCC TGTACTGCCC GGAGACGAAG CCGTCGCTGC CACCTGGGGC GTACTCTCCG CAGCCGCCAC CCGGGCCGGA CAGCCCCGTC CAGTCAACGA CATGTGGATC GCGGCGTGCT GCCTCACCCA CAATCTGCCG CTCGCCACCT TGAACCTGAA GGACTGCATG TACTTCAGGG ATCATCATGG TCTACGGATT CTTGGCGAGG AGTAA
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Protein sequence | MQPVVLDTDI ASLSHKRRLS RPVATHLIGR RPLITFVTFG ELTKWTDPRD WGSRRRQELA DWLSGIPVLP GDEAVAATWG VLSAAATRAG QPRPVNDMWI AACCLTHNLP LATLNLKDCM YFRDHHGLRI LGEE
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