Gene Francci3_2617 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2617 
Symbol 
ID3906523 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp3091097 
End bp3091501 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content64% 
IMG OID637879942 
Productnucleic acid binding protein 
Protein accessionYP_481708 
Protein GI86741308 
COG category[R] General function prediction only 
COG ID[COG1487] Predicted nucleic acid-binding protein, contains PIN domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.243477 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAGCCCG TCGTCCTTGA CACCGACATC GCCTCCCTGA GTCACAAGCG CAGGCTCAGC 
AGGCCCGTGG CAACCCACCT GATCGGCCGC CGGCCGCTGA TCACCTTCGT GACCTTCGGT
GAGCTCACCA AGTGGACCGA TCCGCGAGAC TGGGGTAGTC GTCGACGTCA GGAACTCGCC
GACTGGCTTT CGGGAATCCC TGTACTGCCC GGAGACGAAG CCGTCGCTGC CACCTGGGGC
GTACTCTCCG CAGCCGCCAC CCGGGCCGGA CAGCCCCGTC CAGTCAACGA CATGTGGATC
GCGGCGTGCT GCCTCACCCA CAATCTGCCG CTCGCCACCT TGAACCTGAA GGACTGCATG
TACTTCAGGG ATCATCATGG TCTACGGATT CTTGGCGAGG AGTAA
 
Protein sequence
MQPVVLDTDI ASLSHKRRLS RPVATHLIGR RPLITFVTFG ELTKWTDPRD WGSRRRQELA 
DWLSGIPVLP GDEAVAATWG VLSAAATRAG QPRPVNDMWI AACCLTHNLP LATLNLKDCM
YFRDHHGLRI LGEE