Gene Francci3_2595 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2595 
Symbol 
ID3906501 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp3061781 
End bp3062779 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content64% 
IMG OID637879920 
Productradical SAM family protein 
Protein accessionYP_481686 
Protein GI86741286 
COG category[R] General function prediction only 
COG ID[COG0535] Predicted Fe-S oxidoreductases 
TIGRFAM ID[TIGR03470] hopanoid biosynthesis associated radical SAM protein HpnH 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.90136 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0805169 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCATTC CGCGGCGCCA GGCAATCAGG ATCGGCGCTT ATCTCCTCAA ACAGAAACTC 
GCCAGACGGG ACAAGTTCCC GATCACCCTC GAACTCGAAC CCCTGTTCGC ATGTAACCTC
GCCTGTGAGG GCTGCGGCAA GATCCAACAT CCCGCGGACG TGCTGAAACA GCGCATGCCC
GTCGAGCAGG CGCTCGCCGC CGTCGACGAG TGCGGCGCCC CCGTGGTGTG CCTGGCAGGC
GGCGAACCGC TGATGCACCC GCAGATCGAG GACATCGTGG CAGGCCTGGT GAAACGTAAG
AAGTTCATCT ACCTGTGCAC GAACGCCCTC CTGATCCCAC GCAAGATCGA CAAGCTGCGT
CCGTCACCGT ACCTGTCCTT CGCGGTACAC ATCGACGGCC TCGAGGAACG CCATGACAAG
TCCGTGGCCA AGCCGGGCGT GTTCGCCCAG GCCGTGGACA ACATCAAAGA GGCGCAGCGC
CGCGGCTTCC GCGTCACCAC GAACACCACG TTCTTCAACA CCGACACCCC TCAGACCGTG
ATCGAGGTGT TGGACTTCCT CAACAACGAC CTCAACGTCG ACGGGATGAT GCTCTCCCCC
GCCTACGCCT ACGAGAAAGC CCCCGACCAG GACAGCTTCC TCGGGGTCAA GGAAACCCAG
GAACTGTTCC GCAAGGCGTT CGCCGACGGC CGCCGCAAGA ACTGGCGGAT CAGCCACTCC
CCCCTGTTCC TGGACTTCCT CGAAGGCAAG ATCGACTTCC CGTGCACGGC CTGGGGCATT
CCGTCCTACT CCCTGTACGG CTGGCAGAAG CCGTGCTATC TGATGGGCGA CGGCTACGCC
AAGACCTACC AGGAACTCCT TGACACCACC GACTGGGAGG CCTACGGACG AGGCCGCGAC
CCACGCTGCG CGAACTGCAT GGCACACTGC GGCTACGAAC CGACCGCCCT CGCGGCGACC
CTGTCCTCCC TGCGGGAATC CATCCGCGCG GCCCGCTGA
 
Protein sequence
MAIPRRQAIR IGAYLLKQKL ARRDKFPITL ELEPLFACNL ACEGCGKIQH PADVLKQRMP 
VEQALAAVDE CGAPVVCLAG GEPLMHPQIE DIVAGLVKRK KFIYLCTNAL LIPRKIDKLR
PSPYLSFAVH IDGLEERHDK SVAKPGVFAQ AVDNIKEAQR RGFRVTTNTT FFNTDTPQTV
IEVLDFLNND LNVDGMMLSP AYAYEKAPDQ DSFLGVKETQ ELFRKAFADG RRKNWRISHS
PLFLDFLEGK IDFPCTAWGI PSYSLYGWQK PCYLMGDGYA KTYQELLDTT DWEAYGRGRD
PRCANCMAHC GYEPTALAAT LSSLRESIRA AR