Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_2595 |
Symbol | |
ID | 3906501 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 3061781 |
End bp | 3062779 |
Gene Length | 999 bp |
Protein Length | 332 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637879920 |
Product | radical SAM family protein |
Protein accession | YP_481686 |
Protein GI | 86741286 |
COG category | [R] General function prediction only |
COG ID | [COG0535] Predicted Fe-S oxidoreductases |
TIGRFAM ID | [TIGR03470] hopanoid biosynthesis associated radical SAM protein HpnH |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.90136 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0805169 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCATTC CGCGGCGCCA GGCAATCAGG ATCGGCGCTT ATCTCCTCAA ACAGAAACTC GCCAGACGGG ACAAGTTCCC GATCACCCTC GAACTCGAAC CCCTGTTCGC ATGTAACCTC GCCTGTGAGG GCTGCGGCAA GATCCAACAT CCCGCGGACG TGCTGAAACA GCGCATGCCC GTCGAGCAGG CGCTCGCCGC CGTCGACGAG TGCGGCGCCC CCGTGGTGTG CCTGGCAGGC GGCGAACCGC TGATGCACCC GCAGATCGAG GACATCGTGG CAGGCCTGGT GAAACGTAAG AAGTTCATCT ACCTGTGCAC GAACGCCCTC CTGATCCCAC GCAAGATCGA CAAGCTGCGT CCGTCACCGT ACCTGTCCTT CGCGGTACAC ATCGACGGCC TCGAGGAACG CCATGACAAG TCCGTGGCCA AGCCGGGCGT GTTCGCCCAG GCCGTGGACA ACATCAAAGA GGCGCAGCGC CGCGGCTTCC GCGTCACCAC GAACACCACG TTCTTCAACA CCGACACCCC TCAGACCGTG ATCGAGGTGT TGGACTTCCT CAACAACGAC CTCAACGTCG ACGGGATGAT GCTCTCCCCC GCCTACGCCT ACGAGAAAGC CCCCGACCAG GACAGCTTCC TCGGGGTCAA GGAAACCCAG GAACTGTTCC GCAAGGCGTT CGCCGACGGC CGCCGCAAGA ACTGGCGGAT CAGCCACTCC CCCCTGTTCC TGGACTTCCT CGAAGGCAAG ATCGACTTCC CGTGCACGGC CTGGGGCATT CCGTCCTACT CCCTGTACGG CTGGCAGAAG CCGTGCTATC TGATGGGCGA CGGCTACGCC AAGACCTACC AGGAACTCCT TGACACCACC GACTGGGAGG CCTACGGACG AGGCCGCGAC CCACGCTGCG CGAACTGCAT GGCACACTGC GGCTACGAAC CGACCGCCCT CGCGGCGACC CTGTCCTCCC TGCGGGAATC CATCCGCGCG GCCCGCTGA
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Protein sequence | MAIPRRQAIR IGAYLLKQKL ARRDKFPITL ELEPLFACNL ACEGCGKIQH PADVLKQRMP VEQALAAVDE CGAPVVCLAG GEPLMHPQIE DIVAGLVKRK KFIYLCTNAL LIPRKIDKLR PSPYLSFAVH IDGLEERHDK SVAKPGVFAQ AVDNIKEAQR RGFRVTTNTT FFNTDTPQTV IEVLDFLNND LNVDGMMLSP AYAYEKAPDQ DSFLGVKETQ ELFRKAFADG RRKNWRISHS PLFLDFLEGK IDFPCTAWGI PSYSLYGWQK PCYLMGDGYA KTYQELLDTT DWEAYGRGRD PRCANCMAHC GYEPTALAAT LSSLRESIRA AR
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