| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2583 |
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| Symbol | nhaA |
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| ID | 3906489 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 3047313 |
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| End bp | 3048641 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637879908 |
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| Product | pH-dependent sodium/proton antiporter |
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| Protein accession | YP_481674 |
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| Protein GI | 86741274 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3004] Na+/H+ antiporter |
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| TIGRFAM ID | [TIGR00773] Na+/H+ antiporter NhaA |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.281476 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGCCAAG TTCCGTCTCG CCGGTTCAGC CTGTTCGACC GCAGGTCGTG GCCCGAGGCT
CGCCGGATCG CCGAGATCCT ACGCAGGGAG GCCATCGGTG GCGGGCTGCT GCTCGCCGCG
ACGGTCCTGG CCTTGGGCTG GGCGAACTCG CCGTGGTCAG AGTCGTACCA GTCGATGCTG
TCCTACCAGC TCGGCCCGTC CTGGGCGCAC CTGGACCTCA CCCTGGCTCA GTGGGCCGCC
GACGGCCTGC TAGCGATCTT CTTCTTCGTT GCCGGGCTGG AACTCAAACG CGAGTTCATC
GCCGGAGACC TCCGCGACCC TCGGCGGGCC GCTGTCCCGG TCCTGGCCGC CTGCGGGGGT
GTCGCCGTTC CGGCCGTGCT GTACGCGCTG GTCAACGTCG GCGGTGACGC CTCAGCGGGC
TGGGCGATCC CGACCGCCAC CGACATCGCC TTCGCGCTGG CGGTGCTGGC GGTCATTGGC
CGGCACCTGC CGTCCGGTCT GCGGACCTTC CTGCTCACCC TCGCGGTCGT CGATGACCTG
CTCGCCATCG TCATCATCGC CGTCGTCTAC ACCCGCCACC TGTCGATCCT CCCGTTGCTG
GGCGCGCTGG TGCCGCTGGC GTTGTTCACT CTGCTGGTCC AGCGCCGGGT GCGCTCGTGG
TGGCTCCTCC TGCCCTTGGC CGCCGCGACC TGGACACTGG TCCACGCCTC CGGCGTGCAC
GCCACCGTGG CTGGCGTGCT GCTGGGGTTT GCCGTGCCGG TGCTCCGCGG TACCCGTGCC
GGCGGCCCGG AGGCGGGACC GGGGCTGGCC GAGCACTTCG AGCACCGCTG GCGGCCCCTG
TCGGCCGGGG TGGCGGTGCC GATCTTCGCG TTCTTCTCCG CCGGAGTCAC CGTCGATGGC
CTGAGCGGAC TGAGCGCGGC GCTGAGCGAC CGGGCGGCCC TCGGTGTCGT GCTCGGTCTC
GTCGTCGGCA AGCCTCTGGG GATCATGGCC GCTACCTTCC TGGTAGCACG CTTCACTCGC
GCCACCCTCG ACGACGGGTT GACCTGGACC GACGTTCTCG GGCTCGCGGT CTTGGCCGGT
ATCGGATTCA CCGTCTCCCT GCTCATCGGC GAACTGGCCT TCGGGAGCGG CAGCGCACGT
GACGACCATG TCAAGATCGC TGTCCTGACG GGTTCTCTGC TCGCCGCCCT GCTCGCCGCC
GTCGTGCTAC GTCTGCGCAA TCGCGTCTAC CGCCGGCTCC AGGAAGCAGA GACCGCCGAC
CGCGACCACG ACGGCATCCC CGACGTCTAC CAAGACCTGC ACCGGTCCTC CCCACGCCCG
TGGGGGTGA
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| Protein sequence | MGQVPSRRFS LFDRRSWPEA RRIAEILRRE AIGGGLLLAA TVLALGWANS PWSESYQSML
SYQLGPSWAH LDLTLAQWAA DGLLAIFFFV AGLELKREFI AGDLRDPRRA AVPVLAACGG
VAVPAVLYAL VNVGGDASAG WAIPTATDIA FALAVLAVIG RHLPSGLRTF LLTLAVVDDL
LAIVIIAVVY TRHLSILPLL GALVPLALFT LLVQRRVRSW WLLLPLAAAT WTLVHASGVH
ATVAGVLLGF AVPVLRGTRA GGPEAGPGLA EHFEHRWRPL SAGVAVPIFA FFSAGVTVDG
LSGLSAALSD RAALGVVLGL VVGKPLGIMA ATFLVARFTR ATLDDGLTWT DVLGLAVLAG
IGFTVSLLIG ELAFGSGSAR DDHVKIAVLT GSLLAALLAA VVLRLRNRVY RRLQEAETAD
RDHDGIPDVY QDLHRSSPRP WG
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