Gene Francci3_2561 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2561 
Symbol 
ID3904053 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp3022343 
End bp3023122 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content66% 
IMG OID637879886 
ProductNAD(P)H dehydrogenase (quinone) 
Protein accessionYP_481652 
Protein GI86741252 
COG category[R] General function prediction only 
COG ID[COG2249] Putative NADPH-quinone reductase (modulator of drug activity B) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGACGC TGATCGTCTA CGCGCATCCG GAGCCGAAGT CACTCAACGG CTCGTTGAAG 
GACCTCGCAG TGTCCACCTT GGCGACCGCC GGGCACGAGG TACGGGTGAG CGATCTGTAC
GCGATGAACT GGAAGGCGGT CGTGGACGCC GCGGACTACG GTCCCGACGC CTCACGCCCG
CTGAAGGTCG CTCTGGACTC GGGCCGGGCC TTCGACGCCG GGACGCTCAC TCCGGATGTC
CTCGCCGAGC AGGAGAAACT GTGGTGGGCG GACACGATCA TCTTCCAGTT CCCGCTGTGG
TGGTACACGA TGCCCGCGAT CCTCAAAGGC TGGGTGGACC GGGTGTTCAC CTTCCACTTC
GCGTACGGCG TCGGCGAGCA CAGCGACACC AAATACGGCG AGCGCTTCGG CGAAGGCACC
CTCGCGGGAA GGAAGGCCCT GCTGTCGGTG ACCGCCGGCG GGCCCGAGGC GCACTACGCC
GCGCGCGGGA TCAACGGCCC CATCGACGAT CTTCTGTTCC CGATCCACCA CGGCATCCTC
TACTACCCGG GCATCGAGGT ACTGCCGCCG TTCGTGCTGT ACGGCACCGA CCAGATGACC
GGCGAGGACT ACCCGAACGT CGCCAAAGCC TGGGAGCAGC GCCTGCTCAC CCTGGAGTCG
ACCGAGCCGA TCGCGTTCCG ACCACAGAAC TTCGGTGACT ACGAGATCCC CTCGCTGCAC
CTGAAGAAGG GACTGGAGCC CGCGGGCCGC ACGGGTTTCG GGCTGCACGT GCGCAGTTGA
 
Protein sequence
MKTLIVYAHP EPKSLNGSLK DLAVSTLATA GHEVRVSDLY AMNWKAVVDA ADYGPDASRP 
LKVALDSGRA FDAGTLTPDV LAEQEKLWWA DTIIFQFPLW WYTMPAILKG WVDRVFTFHF
AYGVGEHSDT KYGERFGEGT LAGRKALLSV TAGGPEAHYA ARGINGPIDD LLFPIHHGIL
YYPGIEVLPP FVLYGTDQMT GEDYPNVAKA WEQRLLTLES TEPIAFRPQN FGDYEIPSLH
LKKGLEPAGR TGFGLHVRS