Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_2500 |
Symbol | |
ID | 3904878 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 2951434 |
End bp | 2951970 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 637879830 |
Product | MarR family transcriptional regulator |
Protein accession | YP_481596 |
Protein GI | 86741196 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.129036 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCATGCC CGCCGGATGG CTCCGCCCTG CCGCCCTCGG TTCCCGACCC CGCGGGAGTG CCGGGCGTGG ACGTCGACGA GGTCACCGAT GCGGTCCTGA CGGCATCCCG GCTGCTGGTG GCGGTGTCGG CCCGCTCGAT CGCCGCCGTC GGCGAGGATG TCACCCTGCC GCAGTTCCGG ATGCTCGTCG TGCTCGCCGG GCGTGGACCG CAACGCGCCG GGGAGCTCGC CGAGTCGCTT GACGTGCACC CCTCCACGGC CACCCGGATG GCCGACCGGC TCGTCGTTGC CGGGCTGATC CTCCGAGTCG GCAACCCGCG TAACCGGCGG GAGGTCATCG TCGAGCTGAC CGGGCCGGGC CGGCGCCTCG TCGACGAGGT CACCGCCCGG CGCCGGGCCG AGATCGCGAC GATCGTCGCC CGGCTCGCTC CGGACGTGCG GGGCAGCCTG GTCGGCGCGT TGCGCGCCTT CGCGGACGCC GGCGGCGAAC CGGCGGCGAT ATCCGGTCGG GACGCCTCGG CCCTCGGCTG GACCTGA
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Protein sequence | MACPPDGSAL PPSVPDPAGV PGVDVDEVTD AVLTASRLLV AVSARSIAAV GEDVTLPQFR MLVVLAGRGP QRAGELAESL DVHPSTATRM ADRLVVAGLI LRVGNPRNRR EVIVELTGPG RRLVDEVTAR RRAEIATIVA RLAPDVRGSL VGALRAFADA GGEPAAISGR DASALGWT
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