| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2487 |
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| Symbol | |
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| ID | 3904865 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 2933440 |
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| End bp | 2934429 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637879817 |
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| Product | transketolase |
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| Protein accession | YP_481583 |
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| Protein GI | 86741183 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.511484 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.976548 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCCG CGACCATGGT GCGGGCCCTC AACGCCGCGC TGCGCGACTC GCTGCGCGAG
GACGCGCGCG TCCACATCCT CGGCGAGGAC GTTGGCACTC TCGGCGGCGT CTTCCGAGTC
ACCGACGGCT TGGCTGCCGA ATTCGGCGCG CAACGCTGCC TGGACACCCC CCTGGCCGAG
GCAGGCATCC TCGGTACCGC CGTGGGCATG GCCATGTACG GCCTGCGGCC CGTCGTGGAG
CTGCAGTTCG ACGCCTTCGC CTACCCCGCG TTCGAGCAGC TCGCGTCGCA TGTGGCCAAG
ATGCGTAACC GCACGGCCGG GAAGACCACG CTGCCGATCA CCATCCGCAT CCCGTACGGC
GGCGGCGTCG GCGGCGTCGA GCACCACAGC GACTCCAGCG AGGCCTACTA CGCGCACACC
CCCGGCCTGC ACGTCGTCAC CCCCGCCACC GTCGCCGACG GCTACGGGCT GCTCCGCTCG
GCGATTGCCT CGGACGACCC GGTGGTGTTC CTGGAGCCCA AGCGGCTCTA CTGGTCCACG
GACGAGCGGT CCACGGACGA CTTCTCTGCG GCCGAGGTGC CGCCGATCGG CCGGGCGGTG
GTCCGCCGGA CCGGTACCTC GGCGACCCTC CTGACCTACG GCCCCTCGCT CCCCGTGTGC
CTCCAGGCGG CGGCGGCCGC GCGCTCGGAG GGCTGGGACC TGGCGGTGGT CGACCTGCGC
TCGCTGGTCC CCTTCGACGA CGAGACGGTC TGCGAGGCGG TCCGCGCCAC CGGGCGCGCC
GTTGTGGTCC ACGAGGCCGC GGGTTTCGGC GGGGTCGGTG CGGAGATCGC TGCCCGCGTC
AGCGAGCGGT GCTTCCACCA CCTTGCCGCC CCCGTCCTGC GGGTCACCGG CTTCGACATC
CCTTACCCGC CCCCCATGCT CGAACATCAC TACCTTCCCA GCGTCGACCG CATCCTCGAC
GCCGTCGCCC GACTCCAGTG GGAGCAGTGA
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| Protein sequence | MSAATMVRAL NAALRDSLRE DARVHILGED VGTLGGVFRV TDGLAAEFGA QRCLDTPLAE
AGILGTAVGM AMYGLRPVVE LQFDAFAYPA FEQLASHVAK MRNRTAGKTT LPITIRIPYG
GGVGGVEHHS DSSEAYYAHT PGLHVVTPAT VADGYGLLRS AIASDDPVVF LEPKRLYWST
DERSTDDFSA AEVPPIGRAV VRRTGTSATL LTYGPSLPVC LQAAAAARSE GWDLAVVDLR
SLVPFDDETV CEAVRATGRA VVVHEAAGFG GVGAEIAARV SERCFHHLAA PVLRVTGFDI
PYPPPMLEHH YLPSVDRILD AVARLQWEQ
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