Gene Francci3_2431 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2431 
Symbol 
ID3905043 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2824931 
End bp2825329 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content70% 
IMG OID637879761 
ProductNUDIX hydrolase 
Protein accessionYP_481527 
Protein GI86741127 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00584965 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.262781 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGCAAAC GGCAGGCCGT GGTCGCGGTG CTGCTGAGGG CCGGTCGCGT ACTGGTCATC 
CGGCGTGGGC CGCAGGCGCG GAGACCGGGC TACTGGGCTC CGCTGAGCGG CCGGATCGAG
CCCGGCGAGA GCCAGGCGGC GGCGCTGGTT CGCGAGGTCC GTGAGGAGGT GGGGCTGGCG
GTCACCCCCC TTGCGAAGGT CTGGGAATGC GACACCGACG ACGGCAGCTA CCAGCTGCAC
TGGTGGACCG CCGAGGTCGG ATCCGACGAG GAACTGATCC TCGACCCGGG CGAGGTGAGC
GACGCCCGCT GGGTGACGCC GCACGAGTTC ACCCGGCTGG AGCTCACGTT CGCCGGTCAC
CACGAATTCT TCGAACGGGT GCTTCCGACC CTCGGTTAA
 
Protein sequence
MGKRQAVVAV LLRAGRVLVI RRGPQARRPG YWAPLSGRIE PGESQAAALV REVREEVGLA 
VTPLAKVWEC DTDDGSYQLH WWTAEVGSDE ELILDPGEVS DARWVTPHEF TRLELTFAGH
HEFFERVLPT LG