Gene Francci3_2427 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2427 
Symbol 
ID3906410 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2819665 
End bp2820594 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content71% 
IMG OID637879757 
Productcysteine synthase 
Protein accessionYP_481523 
Protein GI86741123 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0031] Cysteine synthase 
TIGRFAM ID[TIGR01136] cysteine synthases
[TIGR01139] cysteine synthase A 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00952791 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.186456 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGATCG CGGAAGACAT CACGCAACTG ATCGGCAACA CGCCGCTGGT CCGATTGCGT 
CGCGTCACGG ACGGAGTGGG AGCCCAGGTC GTGGCCAAAC TGGAGTCCTT CAACCCGGCG
CACAGCGTGA AGGACCGTCT CGGTGTGGCC CTGATCGACG CCGTGGAGCG GGCCGGGCTG
ATCGGGCCGG ACACCGTCAT CCTCGAACCC ACCAGTGGGA ACACCGGCAT CGCCCTGGCC
ATGGTGTGCG CCGCCCGCGG CTACCGCTGC GTCCTGACGA TGCCTGAGAC GATGAGCACC
GAGCGGCGGA TGCTGCTGCG GGCCCTCGGC GCGGAGCTCG TGCTCACCCC CGGTGCCGAG
GGCATGCCCG GCGCCATCGC GAAGGCGGAG GAGCTCGCGA AGAACGACGA ACGGTACCTC
ATCCCGCAGC AATTCGAGAA CCCGGCCAAC CCGGCGATCC ACCGCGCCAC GACCGCCGAG
GAGATCTGGC GCGACACCGA CGGGCAGATC GACGTGCTCG TCGCCGGAGT CGGCACCGGC
GGGACCATCA CCGGCGTCGC CCAGGTCATC AAGGAGCGCA GGCCCGAGGC CCGGTTCGTC
GCCGTGGAGC CGTCGGCATC GCCGGTGCTC TCGGGCGGCG TGAAGGGACC GCACCCGATC
CAGGGCATCG GCGCCGGGTT CGTCCCGCCG GTCCTGGAGA CCGGCCTCGT CGACGAGATC
ATCCAGGTCG ATGGTGAGGA CGCCTTCGAC CTGGCCCGCC GGCTGGCCCA GGAGGAGGGA
CTCCTGGTGG GCATCTCCTC GGGCGCGGCG GTGTCGGCGG CGCTGCAGGT AGCCCGCCGC
CCGGAGAACG CCGGGAAGCT GGTCGTCGTC GTGCTTCCGG ACTTCGGCGA GCGCTACCTG
AGCACACCGT TGTTCGCCGG GCTCGGGTGA
 
Protein sequence
MRIAEDITQL IGNTPLVRLR RVTDGVGAQV VAKLESFNPA HSVKDRLGVA LIDAVERAGL 
IGPDTVILEP TSGNTGIALA MVCAARGYRC VLTMPETMST ERRMLLRALG AELVLTPGAE
GMPGAIAKAE ELAKNDERYL IPQQFENPAN PAIHRATTAE EIWRDTDGQI DVLVAGVGTG
GTITGVAQVI KERRPEARFV AVEPSASPVL SGGVKGPHPI QGIGAGFVPP VLETGLVDEI
IQVDGEDAFD LARRLAQEEG LLVGISSGAA VSAALQVARR PENAGKLVVV VLPDFGERYL
STPLFAGLG