| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2413 |
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| Symbol | |
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| ID | 3906396 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 2801029 |
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| End bp | 2802267 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637879743 |
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| Product | major facilitator transporter |
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| Protein accession | YP_481509 |
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| Protein GI | 86741109 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00423271 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.219014 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTCCGTCT ACAATTTCCG GCTCTTCGCG GGTGGCCAGG TGTTGTCCGT GACGGGAACC
TGGATGATGG TCGTGGCCCA GGACTGGCTC GTCCTTTCGC TGAGCGGCGA CTCGGGAACA
GCCCTGGGCC TCGTGACCGC CCTGCAGTTC ACCCCGATGC TGTTGCTGAC CCTCTACGGC
GGAAGGCTCG CGGACCGCTA CGACAAACGC CGGCTACTGA CCGTCGCGAA CCTGGCCTCC
GGACTGCTCG CCCTGGCGCT GTCGCTGCTG GTGTTAACCG GCACGGTCCG GCTGTGGCAC
ATCTGCCTGT TCGCACTGGG CCTCGGTCTC GTGAACGCCG TCGAGATGCC GACCCGGATG
GCATTCGTGA GCGAGCTGGT CGGCGCCGAA CTCCTCCCCA ACGCGTCGGC GCTGAGCGCG
GCGTACTTCA ACGTCGCCCG GGTCGCCGGC CCGGCCGTCG CCGGCCCGTT GATCGGCGGC
TTCGGTACCG GCCCGGTCAT GATGTTCAAC GCCGTGAGCT ACCTCGCGAC GGTGGTGGGT
CTGCGGATGA TGCGCCCGGC CGAGATGCAC CGCGACGCGC GCCGGGCGAC CTCCACCCGC
GTCGTCGACG GACTGCGGTA CGTGCTCGGC CGGGAGGACC TGGTGCTCGT GCTTGGACTC
GTCGCGACGA TCGGGCTGTT CGGCCTGAAC TTCCAGCTCA CCGTGCCCCT GCTCGCCAGG
ACGGTATTTC ATGCCGACGC GGCGGCCTTC GGGCTGCTCA CCAGCGGGCT CGCCGCCGGA
TCGCTGCTCG CGGCCCTCGT GACGACCGCC CGCCGCACCC GCCCGTCGGC CGGCATGGTG
ATCGGATCCG CGCTCGCGTT CGGCCTGCTG GAGACGGTGA CCGGCTGGGC GCCCAGCTAT
GCCACGGCGG CCGTGCTCCT GATCCCTACC GGCTTCGCGA CGATCTACTT CGCTCAGGCG
GCGAACCACC GCATCCAGCT CGGCAGCGAT CCGCAGTACC GAGGCCGGGT GATGGCGATC
TATACCCTGA TCCTGCAGGG ATCGACGCCG CTAGGTGCCC TGTTCGTCGG CTGGCTCACC
GAGCACCGTG GCGCCCGCGC CGGGTTCTAC ATCGGAGGTC TCGTTTCGGT CGCCGCCGCG
ATCGCCACAC TGGTGGTGGA CCGCATGCGG GCCGCGGCCG TCGACGACCC GCCACGCCCC
GGCGCCCCGG CGCCCGGCGC CCGAACTGTA GAGGGTTAG
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| Protein sequence | MSVYNFRLFA GGQVLSVTGT WMMVVAQDWL VLSLSGDSGT ALGLVTALQF TPMLLLTLYG
GRLADRYDKR RLLTVANLAS GLLALALSLL VLTGTVRLWH ICLFALGLGL VNAVEMPTRM
AFVSELVGAE LLPNASALSA AYFNVARVAG PAVAGPLIGG FGTGPVMMFN AVSYLATVVG
LRMMRPAEMH RDARRATSTR VVDGLRYVLG REDLVLVLGL VATIGLFGLN FQLTVPLLAR
TVFHADAAAF GLLTSGLAAG SLLAALVTTA RRTRPSAGMV IGSALAFGLL ETVTGWAPSY
ATAAVLLIPT GFATIYFAQA ANHRIQLGSD PQYRGRVMAI YTLILQGSTP LGALFVGWLT
EHRGARAGFY IGGLVSVAAA IATLVVDRMR AAAVDDPPRP GAPAPGARTV EG
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