| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2395 |
|---|
| Symbol | |
|---|
| ID | 3906378 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | + |
|---|
| Start bp | 2773626 |
|---|
| End bp | 2774561 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637879725 |
|---|
| Product | sulfotransferase |
|---|
| Protein accession | YP_481491 |
|---|
| Protein GI | 86741091 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.009967 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0858519 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCTTC CCGACTTCCT CGTGATCGGC GTGCCGAAAG CCGGAACGAC GGCGCTGCAC
GCGGCACTCG TCCGACACCC GGCGCTGTTC CTCCCGTCGG TGAAGGAGCC GAAGTTCTTC
CTGTCGCAGG GGCCGCCGCC GGCCCGGGGC GGCCCCGGTG ACGCCCAGAC GTACCAGGAG
CACGTGTGGC GGCGGGCCGA CTACGAAGCG CTGTTCGATG CCGCTCCGGC GGGGACGCTC
AAGGGCGAGG TCACTCCGTT CTACCTCTAC GACCTGGACG CCCAGAACCG GATCAGGCGG
CTCCTGCCGA AGGCGCGGAT CATCGTCATG CTGCGCAACC CGGTCGACCG CGCACATTCG
AACTGGACCC ATCTGTGGGC GGCGGGGCTG GAGTCGGAAC GTGACTTCGT CCGGGCCTGT
GCTCTGGAGC GTGAGCGCCG GGACGCCGGC TGGGCCCAGT TCTGGCACTA CGTCTCCCTC
GGCCTGTACG GGGAGCAGCT CAGCCATCTG TTCACCCTGT TCTCCCGCGA CCAGGTCCTG
CTGCTGCGCT ACCGGGACCT GCGCGACTCC CCCGCCGCCA CGCTGGACCG GGTCTGCGAG
TTCCTCGGCG TCGAGACGGG TCTGGTGGAC CTGGTGCCCG CCGAGAACGT CACGCCGTTC
GTCGCGGACA CCCCCGTGAA CAGCGTGCTG CGCGCGGCGC TACGCACCGG CGGGCGGATC
GGGCACCACT TCCCGGTTCC CGCGCGCAGG ACCTTCCGCG GTCCGCTGCT CACCGCGTTG
CAGCGGCAGA AGGGCGGACG CCCGAAGCTC ACCGCCGAGC AGCACCGCGC CGTGCTGCCG
TACTTCGTCG ACGACATCGC CCGCCTCGAA GAGATCACCG GCCTGTCCTA CGTCGACTGG
CTCACCGTGG GCCTCGAACC CGAGATCATC GACTGA
|
|---|
| Protein sequence | MALPDFLVIG VPKAGTTALH AALVRHPALF LPSVKEPKFF LSQGPPPARG GPGDAQTYQE
HVWRRADYEA LFDAAPAGTL KGEVTPFYLY DLDAQNRIRR LLPKARIIVM LRNPVDRAHS
NWTHLWAAGL ESERDFVRAC ALERERRDAG WAQFWHYVSL GLYGEQLSHL FTLFSRDQVL
LLRYRDLRDS PAATLDRVCE FLGVETGLVD LVPAENVTPF VADTPVNSVL RAALRTGGRI
GHHFPVPARR TFRGPLLTAL QRQKGGRPKL TAEQHRAVLP YFVDDIARLE EITGLSYVDW
LTVGLEPEII D
|
|---|
| |