| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2389 |
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| Symbol | |
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| ID | 3904596 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 2765207 |
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| End bp | 2766571 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637879719 |
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| Product | putative integral membrane protein |
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| Protein accession | YP_481485 |
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| Protein GI | 86741085 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00613681 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0209947 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGGAT CGCGGTGGGC GTATCCTGAC GGCCCCGCCG TCACCGACGG TCTGACCATC
GGTGCCACGC GTGAGCATAT CGCGGCGGCT CCAGCGGCGG ATCTACCGGC GGCCGATCCG
TACCCGTCCC GGTCCCGCGG CCGGATCAAC GCGCTGTGGA CGATCGTCGA CCAGGTCGTG
TCCAGTGGCA CCAACGCGGC GATCAACTTC ATCATCGCCC GCCGGGTCGA CCCGACCGAG
TTCGGTGCGT TCGCGATTGC CTACACGATC TTCGCGATCG TCGTCGGCCT GTCGCGCGCC
GCTGCCACGG CGCCCCTGGG GATCAGCTAT GCTGCCGCCG CCCCAGCCGC GTTCCGCACC
GCCGCTCGCG CCGCGTCCGG CCTGGCCCTG GTACTCGGTG CCGTCGTGGG CGCCGGCCTG
ATGGCGGTCG GTGGCGTCCT CAAGGGCGTG GTCGGGACGA ACCTGATCGC GATGGGTGTG
GTCATGCCGG CCCTGCTGGT GCAGGATGCC TGGCGCTACA CGTCGTTCGC CCAGGGACGT
CCCCTCCGCG CCGTCGTCAA CGATCTCGTC TGGGCTGCCG GGATGGGCGT GGGCATCGTC
CTGCTGGCCA TCGGCGGGCC GGATGCGGCC GGCGGCGCGC CGGTGATGGT CCTCGTCTGG
GGTGCCGCCG CGGCGCTGGC CGTGCTGGTC GGCATCGGGC AGCATCGGGT CTGGCCCGCC
CCGCGGCGGG CGCTCGCCTG GTTCACTGGT CACCGCGAGA CGACCGGCTT CATGACCGCC
GAGTTCGTGA CGGTCCAGGG GGCGCAGCAG ACGTCGACTC TGATCATCGC CGCGGTCGGC
TCGCCGGCGC TCGTCGGTGC TCTGCGCGGT CTGCAGACCC TGCTCGCCCC CACGACGAAC
CTGGCCGTCG CGTTGATGAG CTTCGCGATC CCCGAGTTCG CCCGCCGCAG GGGTGCCCCG
GCCCGTCGGA TCATCCGCGC CGCCTACGTC GTGTCCGCGC TGGTGGTCGC CTCCAGCGTG
CTGTGGACCC TCATCTTCCT GATCCTCCCC GACGATTTCG GGACGGCCCT GCTGGGCGAT
ACCTGGAGCC AGACCCATGA ACTCCTTCTC CTCGCGATGA TCGCGCAGGC CGGGCCGGCG
CTGGCGGTGG GACCGGCCGC CGTGCTCTAC GCCTTCGGCC GGACCAGACT CACCTTCTGG
ATCAATCTTT TCTTCACGCC CTTCCTGCTC GCCGGCCCGG TCACGGGCCT TCTCCTCGGC
GGAGCCAAAG GGGTGATCAT CGGTAACATC ATTGTGTTCT GGGCGACGAT CCCGCCCTGG
ATTTACCAGC TCCACAAGCA GGCCCATGCC GTCGACCGTG GGTGA
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| Protein sequence | MSGSRWAYPD GPAVTDGLTI GATREHIAAA PAADLPAADP YPSRSRGRIN ALWTIVDQVV
SSGTNAAINF IIARRVDPTE FGAFAIAYTI FAIVVGLSRA AATAPLGISY AAAAPAAFRT
AARAASGLAL VLGAVVGAGL MAVGGVLKGV VGTNLIAMGV VMPALLVQDA WRYTSFAQGR
PLRAVVNDLV WAAGMGVGIV LLAIGGPDAA GGAPVMVLVW GAAAALAVLV GIGQHRVWPA
PRRALAWFTG HRETTGFMTA EFVTVQGAQQ TSTLIIAAVG SPALVGALRG LQTLLAPTTN
LAVALMSFAI PEFARRRGAP ARRIIRAAYV VSALVVASSV LWTLIFLILP DDFGTALLGD
TWSQTHELLL LAMIAQAGPA LAVGPAAVLY AFGRTRLTFW INLFFTPFLL AGPVTGLLLG
GAKGVIIGNI IVFWATIPPW IYQLHKQAHA VDRG
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