Gene Francci3_2379 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2379 
Symbol 
ID3904586 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2756962 
End bp2757555 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content64% 
IMG OID637879709 
Productputative serine/threonine kinaseanti-sigma factor 
Protein accessionYP_481475 
Protein GI86741075 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.084958 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGGCA CCCAGCGTCT CCGGCCAGCG GTCTACGTCG AGGTGTACCG GGCTCCCGCG 
ACCGCCGCAT CGGTGGGCGA CATACGGCGG CATGTCGTCG AACTGGTCCA GCAACGAGGA
GCCGAAGACT GCGCCTATAC GGCCGAGCTG ATCGTGAGCG AACTCGCCAC CAACGCCGTG
AAAGCGTCTG AAACTGCGAG ACAACCGATG ATCGCCGTCC GGACGTCCTT CATCGGCCGC
CTACTCACCG TCGAAGTCTG GGACGGAAGC CCTGCGCTAC CGGAGGCAAG ACCCACCGAT
CTCGACTCGG AAGGCGGCTT GGGACTATTG CTCGTCGACG AACTCGCGCA ACGCTGGTCG
TACTACCTCA CAAAATTAGG GAAGGTCGTT TGGGCGGAGA TCCCCCTCCC CGAGCCCGTC
GCCGTGGATA ACCTCTCAGG CCCAAAACAG ACAGACTTGC CAAGACGCGA GCTGCTTACG
GGGCTACGCA CGCGCCTATC GGACTTCTCA GCCGACTTCG TGACCGACAT GGCGACACTC
CGGCGCGTCG TGGACCGCCT CCGCGCGCTC GACGACTGGA CGACTGGCGA GTAA
 
Protein sequence
MTGTQRLRPA VYVEVYRAPA TAASVGDIRR HVVELVQQRG AEDCAYTAEL IVSELATNAV 
KASETARQPM IAVRTSFIGR LLTVEVWDGS PALPEARPTD LDSEGGLGLL LVDELAQRWS
YYLTKLGKVV WAEIPLPEPV AVDNLSGPKQ TDLPRRELLT GLRTRLSDFS ADFVTDMATL
RRVVDRLRAL DDWTTGE