Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_2379 |
Symbol | |
ID | 3904586 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 2756962 |
End bp | 2757555 |
Gene Length | 594 bp |
Protein Length | 197 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637879709 |
Product | putative serine/threonine kinaseanti-sigma factor |
Protein accession | YP_481475 |
Protein GI | 86741075 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.084958 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGGCA CCCAGCGTCT CCGGCCAGCG GTCTACGTCG AGGTGTACCG GGCTCCCGCG ACCGCCGCAT CGGTGGGCGA CATACGGCGG CATGTCGTCG AACTGGTCCA GCAACGAGGA GCCGAAGACT GCGCCTATAC GGCCGAGCTG ATCGTGAGCG AACTCGCCAC CAACGCCGTG AAAGCGTCTG AAACTGCGAG ACAACCGATG ATCGCCGTCC GGACGTCCTT CATCGGCCGC CTACTCACCG TCGAAGTCTG GGACGGAAGC CCTGCGCTAC CGGAGGCAAG ACCCACCGAT CTCGACTCGG AAGGCGGCTT GGGACTATTG CTCGTCGACG AACTCGCGCA ACGCTGGTCG TACTACCTCA CAAAATTAGG GAAGGTCGTT TGGGCGGAGA TCCCCCTCCC CGAGCCCGTC GCCGTGGATA ACCTCTCAGG CCCAAAACAG ACAGACTTGC CAAGACGCGA GCTGCTTACG GGGCTACGCA CGCGCCTATC GGACTTCTCA GCCGACTTCG TGACCGACAT GGCGACACTC CGGCGCGTCG TGGACCGCCT CCGCGCGCTC GACGACTGGA CGACTGGCGA GTAA
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Protein sequence | MTGTQRLRPA VYVEVYRAPA TAASVGDIRR HVVELVQQRG AEDCAYTAEL IVSELATNAV KASETARQPM IAVRTSFIGR LLTVEVWDGS PALPEARPTD LDSEGGLGLL LVDELAQRWS YYLTKLGKVV WAEIPLPEPV AVDNLSGPKQ TDLPRRELLT GLRTRLSDFS ADFVTDMATL RRVVDRLRAL DDWTTGE
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