| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2297 |
|---|
| Symbol | |
|---|
| ID | 3904831 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | - |
|---|
| Start bp | 2677146 |
|---|
| End bp | 2678819 |
|---|
| Gene Length | 1674 bp |
|---|
| Protein Length | 557 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 78% |
|---|
| IMG OID | 637879628 |
|---|
| Product | cobyrinic acid a,c-diamide synthase |
|---|
| Protein accession | YP_481394 |
|---|
| Protein GI | 86740994 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1797] Cobyrinic acid a,c-diamide synthase |
|---|
| TIGRFAM ID | [TIGR00379] cobyrinic acid a,c-diamide synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.368045 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0207364 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGTGAGCG AGCCCCGGGC GGAGATCGAC ATTCCCCGGC TGGTTCTCGC CGCCCCGGCC
AGCGGCGCCG GCAAGACGAC GGTGACCACC GGGCTGATGG CCGCGTTCAC CGCCCGCGGC
CTGCACGTCT CCCCGCACAA GGTCGGCCCG GACTACATCG ATCCCAGCTA CCACGCGCTG
GCCTGCGGCC GGCCGGGCCG CAACCTCGAC GCGGTGCTCT GCGGCGCGGC GCGCATCGCC
GCGCTGTTCG CCCACGGGGC CCGCGGCGCG GACCTCGCCG TCGTCGAAGG GGTGATGGGC
CTGTTCGACG GGGTGGCCCG TCCCGGTCCC GGTGAGCAGG CCGACCATGC CTCCACCGCG
CACGTCGCCC GGCTGCTCGA CGCCCCCGTC GTGCTCGTCG TCGACGTCTC CGGCGCCGCC
CGCTCGATCG CCGCGCTCGT CGCCGGGTTC CGCGGATTCG ACCGGCGGAT CCGCCTGGCC
GGGGTGATCC TCAACCGGGT CGGTTCCCCC CATCACCGCG ACCTGCTCAC CGAGGCACTC
GACGACATCG CCGTGCCCGT GCTCGGCGCG CTGCCGCGGG AACAGGCCGT CCACACCCCC
TCGCGGCATC TCGGTCTGGT GCCGGCGGCG GAACGCAGAC CCGCCGCCGT CGCCGCCGTC
GACCGGCTCG GCGCGCTGGT CGGATCCGCC TGCGACCTCG ACGCCCTGCT GCGGGTGGCA
CGCACCGCGC CGCCGTTGCG CGTCGCACGT TGGGAGCCGG CCACCGTGCT CGCCGCGGCC
GGACCGGCAG CGGTCACCAC AGCGGACCCG GCGATGCCCG CGATGCCCGA CCGGCCCCCG
CGGGTCGCGG TCGCCGGGGG AGCCGCGTTC ACCTTCGGCT ACCCCGAACA CATCGAGCTG
CTCACCGCCG CGGGCGCCGA CGTCGTCCCC GTCGACCCGC TGCGCGACGA GACGCTGCCA
CCGGGAACCG ACGCCCTGAT CATCGGCGGT GGTTTCCCCG AGGAGCACGT CGCCGCGCTC
GCCGACAACG CCCGGTTACG CGCCGAGGTC GCCGCGTTCG CCGCCCGCGG CGGGCCGGTC
GCCGCCGAGT GCGCCGGACT GCTCTACCTG GCCCGCACCC TGGACGGCGC GCCGATGTGC
GGGGTTCTCG ACGTGGAGGC GGTGATGGGC CCGCGGCTCA CCCTCGGCTA CCGCAGCGCG
ATCGCCGCCG CGGACAGCCC CCTGGCGGCG GCCGGGACCA CCGTGCACGC CCACGAGTTC
CACCGTACGG TCCTACGGCC CCCACCCGGC CGGGCGCCGT GCGACCCACG GTCGCCGTCC
CCCGCCCACG GCGCCGCAGG CCCGCCCCCC GGGTCGTCGT GGGTGGCGGC GTGGTGGCTG
CCGGTACCCG AAACCGCGCC CCGACCCGCA CCGGGACGCG TGGCGGGTGG TGGCCGGCGC
GGCGGGCAGC AGGCGGCGTC GCCGTGGATG TCCGAGGGGT TCGTGTACCG CCGGGTGCAC
GCCTCCTACC TGCATCTGCA CTGGGCTGGA CGGCCCGGCG CCGCCACCCG CCTGCTCGCC
GCCGCCCGCG CGGCCCGCCG GGAGGACGGC CGGGACACCG CCGGCGCCGC ACCCCGCGTC
CGCGCCCCGA AGCCCGCCGG CCCACCCGGC CGGATCCAGC CCGGCGCGGC GTGA
|
|---|
| Protein sequence | MVSEPRAEID IPRLVLAAPA SGAGKTTVTT GLMAAFTARG LHVSPHKVGP DYIDPSYHAL
ACGRPGRNLD AVLCGAARIA ALFAHGARGA DLAVVEGVMG LFDGVARPGP GEQADHASTA
HVARLLDAPV VLVVDVSGAA RSIAALVAGF RGFDRRIRLA GVILNRVGSP HHRDLLTEAL
DDIAVPVLGA LPREQAVHTP SRHLGLVPAA ERRPAAVAAV DRLGALVGSA CDLDALLRVA
RTAPPLRVAR WEPATVLAAA GPAAVTTADP AMPAMPDRPP RVAVAGGAAF TFGYPEHIEL
LTAAGADVVP VDPLRDETLP PGTDALIIGG GFPEEHVAAL ADNARLRAEV AAFAARGGPV
AAECAGLLYL ARTLDGAPMC GVLDVEAVMG PRLTLGYRSA IAAADSPLAA AGTTVHAHEF
HRTVLRPPPG RAPCDPRSPS PAHGAAGPPP GSSWVAAWWL PVPETAPRPA PGRVAGGGRR
GGQQAASPWM SEGFVYRRVH ASYLHLHWAG RPGAATRLLA AARAARREDG RDTAGAAPRV
RAPKPAGPPG RIQPGAA
|
|---|
| |