| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2289 |
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| Symbol | |
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| ID | 3904823 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 2669805 |
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| End bp | 2671262 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 637879620 |
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| Product | major facilitator transporter |
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| Protein accession | YP_481386 |
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| Protein GI | 86740986 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00392793 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000728467 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGACCCGG GCGTGCGTAC CTCCGCATCC CGCAACACCC TGATGTCGCT GCTGGCCCAC
GAGCGGGCCC GCCCTCGCGC GGTCCGCGAC CTGCCGGGCG GCTGGTGGCT GGCGGTCGCC
ACCGTGTGCT TCGGCGCGTT CATGGGCCAA CTCGACGCCA GCATCGTCAC CCTGGCCTAC
GGGCCGCTGT GCGCACAGTT CCACGCCCCG CTCGCTGCAG TCACCTGGGT CTCCCTGGCC
TACCTGCTCA CCCTGGTCGC CCTGCTGGTG CCCGTCGGCC GGCTCGCCGA CGCCCACGGC
CGCAAACAGT TCTACCTCTA CGGACTCCTC GTCTTCACCG CCACCTCGGC CGCCTGTGGC
CTGGCTCCCA GCCTCGCCGC TTTGATCGGT TCCCGCGTCG CGCAGGCCGT CGGCGCCGCG
ATGCTGCAGG CCAACAGCGT CGCCCTTGTC GCCACCAGCG CACCCCGCCC GAGGATGCGC
GCCGCCCTGG GCGTCCAGGC CGCCGCCCAG GCCCTCGGCC TCGCTCTCGG CCCCACCCTC
GGCGGAGCCC TGGTCACCAC CCTCGGCTGG CGCTGGGTGT TCGCCATCAA CGTCCCCGTC
GGGACAATCG CCCTCATCGC CGGCTACTAC CTGCTACCCC GCACCCGCCA GCGCACCGAC
CCTGCCCCCT TCGACTGGCC GGGCCTGGCC CTCCTCGCCA CCGCCACCAC CACCCTGCTG
CTGGCCATCT CGGCCGTCTC CGGCCTGAAC CTGCCCTCCG CGGCCACCGC CATCCTCGCC
ATCCTCGCCC CGCTCGCCGG CTACGGCCTC GTCCAACGGG AACGCCGCGC GCCGGCACCC
CTGATCGACC TGCGCCTCCT TCGCATCCCT GCCCTCGCGG GGGGACTCGT CGGCGCGCTG
TGCGGCTACC TCGTCCTGTT CGGCCCGCTC GTCCTGGTCC CCGTCGTCCT CACCGACCGC
GGCACCTCCC CCCTGCACGC CGGGCTGGTC CTCACCGCCC TGCCCGGAGG CTTCGCGCTC
GCCGCCAGCG GCGCCGGGGC GGTCCTACCC GACCGGTGGA GCGACCGCCG CCGCTACGCG
CTCGGCGCCG TCACCTGCAC GATGGCACTC GCCGCCGCAC TCGCCGTGCC ACTGTCCGCA
CCCTGGCTGA TCCCCCCGAT GGCCATGCTC GGCCTCGGCC TCGGCGTCTA CACCCCCACC
AACAACACCA CGATCATGAG TGCGATCCCG GCCCACGCGT CGGGTACCGG CGGCGGACTG
GTCAACATGA CCCGCGGTCT GGGCACCGCC CTCGGCGTGG CCATGGTCAC CCTCGCCGTC
CACCTCGCCG CCGGCGCCAC CGGACCCCGC CTGGCAATCG TCGGCCTCAC CGCGGCATCC
CTCCTCCTGT TCACCCCCCT CCTCACCCCT AGCCGGGGCA TGAGGAACAT CGGAACGGAA
AACAGCGCCA GGTGCTGA
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| Protein sequence | MDPGVRTSAS RNTLMSLLAH ERARPRAVRD LPGGWWLAVA TVCFGAFMGQ LDASIVTLAY
GPLCAQFHAP LAAVTWVSLA YLLTLVALLV PVGRLADAHG RKQFYLYGLL VFTATSAACG
LAPSLAALIG SRVAQAVGAA MLQANSVALV ATSAPRPRMR AALGVQAAAQ ALGLALGPTL
GGALVTTLGW RWVFAINVPV GTIALIAGYY LLPRTRQRTD PAPFDWPGLA LLATATTTLL
LAISAVSGLN LPSAATAILA ILAPLAGYGL VQRERRAPAP LIDLRLLRIP ALAGGLVGAL
CGYLVLFGPL VLVPVVLTDR GTSPLHAGLV LTALPGGFAL AASGAGAVLP DRWSDRRRYA
LGAVTCTMAL AAALAVPLSA PWLIPPMAML GLGLGVYTPT NNTTIMSAIP AHASGTGGGL
VNMTRGLGTA LGVAMVTLAV HLAAGATGPR LAIVGLTAAS LLLFTPLLTP SRGMRNIGTE
NSARC
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