| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2253 |
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| Symbol | |
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| ID | 3905021 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 2630775 |
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| End bp | 2631722 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637879584 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_481350 |
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| Protein GI | 86740950 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.000833121 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00553591 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGCCGTGGC TCTACCAGAC GCCGGTACTG GTGTCGCTGG CGGTCTTCGT CTACGGGCCG
CTGCTCTTCG AGGCGTACCT GAGCCTGACG AACTGGGACC TGATCAAACC CGACCAGGAC
TTCGTGGGGC TTGCCAACTT CCGCGGCCTG TTCGAGGGCG AAGAGTTCCC CCGGGCGCTG
AGCCGCACCG GCCTCTACGT CCTGGTGATG TTGCCCTTCG CGACGGTCGT CCCGATGGCG
CTGGCGATCA TGTTGTGGAA GCGGCCCGGT CGGACCAGCG ACATCTACCG GGCCCTGCTG
TTCCTGCCGG TGATGCTCGC CCCTGTCGCG AACGCGCTGT CCTGGCGGTT CGTCCTCGAC
CCGCTCGGCG GGATCGTCAA CGTCGTCACC GGCGGGCTGG GCCTGGGCGA GCGGGACTGG
CTCGGTGATC CCTCGACCGC CCTCGCCGCC ATCTCGCTCG TCACCGCGGC CCGGTTCGTC
GCGCTCAACA TGCTGCTCTA CGGCGCGGCA CTGGCCGCGA TCGACCGGCG CTGCCTCGAC
GCCGCCCGCG TCGACGGCGC CACCGAATGG GAGATCACCC GCCGTCTCGT GGTCCCCCAA
CTGCGTGGCA CCACGATCCT GCTGTCGTTC CTGTGCGCGG TGTTCGCCGG GCAGTGGACG
TTCACCAACA TCGCCGTGCT CACCCAGGGC GGCCCCGACA ACACCACCGA CAACGTCTAC
TACCGTCTGT ACACCTACGC GTTCACCTAC TTCGACGCCG GGACGGGCGC GGCGGCGGCG
CTGACGATCG TGGTGGTCCT GTGCGCCCTG TTCGGCCTGT CGACGCTGGC CCGCCGCGTC
GCCGGCACGT TCGGCGCCCC GGGCCGGGAC CGGCCGACCA CCCGGCTCGC GGCCGCCCTC
GCCGCCCCGC TGACCGCGCT GACCAGGAGG CGCCGTGCCG CGCTCTGA
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| Protein sequence | MPWLYQTPVL VSLAVFVYGP LLFEAYLSLT NWDLIKPDQD FVGLANFRGL FEGEEFPRAL
SRTGLYVLVM LPFATVVPMA LAIMLWKRPG RTSDIYRALL FLPVMLAPVA NALSWRFVLD
PLGGIVNVVT GGLGLGERDW LGDPSTALAA ISLVTAARFV ALNMLLYGAA LAAIDRRCLD
AARVDGATEW EITRRLVVPQ LRGTTILLSF LCAVFAGQWT FTNIAVLTQG GPDNTTDNVY
YRLYTYAFTY FDAGTGAAAA LTIVVVLCAL FGLSTLARRV AGTFGAPGRD RPTTRLAAAL
AAPLTALTRR RRAAL
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