Gene Francci3_2222 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2222 
Symbol 
ID3906361 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2596339 
End bp2597796 
Gene Length1458 bp 
Protein Length485 aa 
Translation table11 
GC content71% 
IMG OID637879553 
ProductHNH endonuclease 
Protein accessionYP_481319 
Protein GI86740919 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCA CCGATCCCGC CACCGATCCC GCCACCGATC CCGCCACCGA TCCCGCCACC 
GATCCCGCCA CCGGGCAGCA TCGGGTGCTG TCCGGGTTGG TGGGGGTGGC CGGGCAGGTG
GGTGGCCTGG TAGAGGCGCC GGTGTGGTCG TTGTCGGACG CCGAGTTGTA CGGCGCCCTG
GACGACTGTT CGGTGGAGCT GGCCCGCCTT GCCGCGGTGC GGCTCGCGCT GGCGCGGGAG
GCTCATGGGC GGAACCTGGC CGCGCGGGAG GGCGCGGCCG GTACGGCAGC GTTGCTGCGG
GAACGGCTGC GGATGCGTCC CGTTGACGCC CGGCGTCTGC TTGATCTCGC GATTGCCGTG
GATGGCCCGC TGGCCGCGAC CGGCGCTGCC CTGACCGCCG GTGTGATCAC TGTAGAGCAA
GCATGGGAGA TCCACCTGGC GCTGCGTTCT CTGCCGCGTG GCCTCGGCGC CGAGGTGTAT
ACCGCCGCGG AGGCTTCGCT GCTGGAGCTG GCCTGGATGT TCGACCCCGC GGAGCTGGCC
CGTCTCGGCC GGCACCTGCG CGAACAGCTC ACCCAGATCG ATACCAGCCC CGGCGGCGAC
GGGCCCACCG ACACCGGTCA CCACAACGAC CCGGACAGCC AGAGCGATGC GGGCGACCAG
AGCGATGCGG GCGACCGGGA CGGTAGGCCG GGTCCCGGTA GTGATCCTGC CGACCGGCGG
GGTCTGTGGT TGACCGACCT GCCGGGCGGG ACCACGCGGA TCAGCGGCAC CCTTGATGCC
GAAGCCGCCG CCCTGCTGCG TTCGGCGTTG GATCCGCTGG CCGGACCCCG CCCCGGCGAT
GACGGCACCG CCGATCCGCG TTCCCCGGCG CGGCGGCGTG CCGACGCCTT CGTCGAGCTG
TTCCACCGCG TGCTCGGTGC CGGCGTTCTG CCCGTGACCG GTGGGGTGCG CCCGCATCTG
ACGGTGACCG TGCCGTGGGC GGCGCTGCTC GGCCACGGCG GGCCTCCGGC CTCGACCGGC
TGGGGTCAGC CGCTGCCGGC CGGTGTGCTG CGCCGCCTGG CCTGTGACGC CTCGGTCGGC
CGGGTGCTGT TCGATGCGGC CAGCGTTCCG TTGGATGTCG GTCGTGCCTA CCGGAGCGCA
CCGGCGGATC TGCGTCGCGC CGTCATCGCC CGCGATGTCT GCTGCGCATA TCCGGGATGT
GACCGCCCGT CGTCGTGGTG TGAAATTCAC CATGTTCGTC ATTGGATAGA CGGCGGAGAA
ACCTCGCTCG ACAATCTGGT CTTGCTGTGC GGATATCATC ACCGGTTCGT GCACCACCAG
GGTTGGACCG TCCGGCTCGG CCCCGACCGC CGGCCCGAGT TCCTTCCTCC ACCCTGGATC
GACCTGGCAC GAAAACCCCG CCGCAACCCC TATTCACGAC ATACCGCCGA CCTCCTACAC
ACCGCGCCAG GCGGATAA
 
Protein sequence
MTATDPATDP ATDPATDPAT DPATGQHRVL SGLVGVAGQV GGLVEAPVWS LSDAELYGAL 
DDCSVELARL AAVRLALARE AHGRNLAARE GAAGTAALLR ERLRMRPVDA RRLLDLAIAV
DGPLAATGAA LTAGVITVEQ AWEIHLALRS LPRGLGAEVY TAAEASLLEL AWMFDPAELA
RLGRHLREQL TQIDTSPGGD GPTDTGHHND PDSQSDAGDQ SDAGDRDGRP GPGSDPADRR
GLWLTDLPGG TTRISGTLDA EAAALLRSAL DPLAGPRPGD DGTADPRSPA RRRADAFVEL
FHRVLGAGVL PVTGGVRPHL TVTVPWAALL GHGGPPASTG WGQPLPAGVL RRLACDASVG
RVLFDAASVP LDVGRAYRSA PADLRRAVIA RDVCCAYPGC DRPSSWCEIH HVRHWIDGGE
TSLDNLVLLC GYHHRFVHHQ GWTVRLGPDR RPEFLPPPWI DLARKPRRNP YSRHTADLLH
TAPGG