| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2203 |
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| Symbol | |
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| ID | 3906342 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 2575017 |
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| End bp | 2577236 |
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| Gene Length | 2220 bp |
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| Protein Length | 739 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637879535 |
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| Product | isocitrate dehydrogenase, NADP-dependent |
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| Protein accession | YP_481301 |
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| Protein GI | 86740901 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2838] Monomeric isocitrate dehydrogenase |
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| TIGRFAM ID | [TIGR00178] isocitrate dehydrogenase, NADP-dependent, monomeric type |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.199816 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACTGACT CGACCATCAT CTATACACAC ACTGACGAGG CTCCGGCCCT GGCGACGTAC
TCGTTCCTGC CCGTGGTCCA GGCGTACGCC GCGACGGCCG GGGTTAGTGT CGACAGCCGC
GACATCTCCC TGGCGGGGCG GATCATCGCC AGTTTCCCCG AGGATCTCGA GGAGGCCCAG
CGCATCGAGG ACGCGCTCGC CGAGCTCGGT GAGCTGGCCA GGACGCCCGA GGCGAACATC
ATCAAGCTGC CGAACATCTC GGCTTCGATT CCGCAGCTGA AGGCGGCGAT CGTCGAGCTG
CAGAAGCGGG GCTATGCGCT GCCGGACTAC CCGGACGACC CGAAGACCGA CGAGGAGCGG
GAGATCCGCG CCCGTTATGA CAAGGTGAAG GGCAGCGCCG TCAACCCGGT GCTGCGCGAG
GGCAACTCCG ACCGCCGCGC CCCGGCCTCG GTGAAGAACT ACGCCCGGAC CCACCCGCAC
CGGATGGGCG CGTGGACACC CGACTCGAAG ACGAACGTCG CCACGATGGG CGCCGGCGAC
TTCCGCTCCA CCGAGAAGTC CACGATCATC GCCGCGGCCG GCACGCTGCG CATCGAGCTT
GCGGGTGACG ACGGCAGCAC CACCGTCCTG CTCCCGTCCC TGCCGGTGCT GGCGGGCGAG
GTAGTGGACG CGGCCGTCCT GCGGGTGGCC GCGCTGCGCG AGTTCCTCAC CGCGCAGATC
GCCCGGGCCA AGGCCGAGGG CGTGCTGTTT TCGGTGCACC TGAAGGCCAC GATGATGAAG
GTCTCCGACC CGATCATCTT CGGCCACGTG GTACGGGCCT TCTTCCCGAA GACGTTCGCC
ACCCACGGCG CGACGCTCGC CGCGGCCGGC CTGTCCCCGA ACGACGGGCT CGGCGGTATC
CTCAAGGGCC TGGAATCGCT GCCCGAGGGC GCGCAGATCA AGGCCTCCTT CGCCGCGGAG
CTCGCCGAGG GCCCCGCCCT GGCAATGGTC GACTCCGACC GCGGCATCAC CAACCTGCAC
GTGCCCAGCG ACGTCATCGT CGACGCCTCC ATGCCGGCCA TGATCCGTAC CTCCGGCCAC
ATGTGGGGCC CGGACGGCCG GGAGGCGGAC ACCCTGGCGG TCCTGCCCGA CTCGAGCTAC
GCCGGCATCT ACCAGGTCGC CATCGACGAC TGCCGGGCGC ACGGCGCCTA CGACCCCGCG
ACGATGGGCT CGGTGGCCAA CGTCGGCCTG ATGGCGCAGA AGGCCGAGGA GTACGGCAGC
CACGACAAGA CCTTCGAGAT CCCCACCACG GGCACGGTGC GGATCGTCGA CCAGGCCGGC
ACCGTGGTGC TGGAGCAGGC GGTCGCCGCC GGCGACATCT TTCGCGCCTG CCAGACCAAG
GACGCGCCGA TCCGGGACTG GGTGAAGCTC GCCGTCGCGC GCGCCCGCGC CACCGGTGAC
CCGGCGGTGT TCTGGCTCGA CGAGAACCGC GCCCACGACG CGAGGCTGAT CGAGAAGGTC
CGGGCGTATC TGCCCGGGCA CGACACCTCC GGGCTGCGGA TCGAGATCAA GGCTCCGGTC
GACGCGATCG CGTTCTCACT GGAGCGGATC CGCCGCGGCG AGAACACGAT CTCAGTCACC
GGCAACGTGC TGCGTGACTA TCTGACCGAC CTGTTCCCGA TCCTGGAGCT CGGCACGAGT
GCCAAGATGC TCTCGATCGT CCCGCTCATG AACGGTGGCG GCCTGTTCGA GACCGGCGCC
GGCGGCTCCG CGCCCAAGCA CGTCCAGCAG CTGCTCAGGG AGAACTACCT GCGCTGGGAC
AGCCTGGGCG AGTTCCTGGC GCTCGCGGCC AGCTTCGAGC AGTTCGCGCG GACGACGGGC
AACGCGCGTG CCCAGGTGCT CGCCGACACC CTCGACCGCG CGACCGCCAC CTTCCTCAAC
GAGGACAAGT CGCCCAGCCG CCGGCTGGGT GGCCTCGACA ACCGCGGCAG CCATTTCTAC
CTGGCGCTCT ACTGGGCGCA GGAGCTGGCC GCGCAGATCG GCGACCCCCG TCTCGCGGAG
GCGTTCGCCG GTCTCGCCAA GACGCTCGCC GACCAGGAGA AGGCGATCGT CGACGAACTG
ATCGCGGTCC AGGGCTCGCC TGCCGACATC GGGGGGTACT ACCAGCCCGA CCCCGTCAAG
GCCGCGGCCG TCATGCGTCC GTCGAAGATC TTCAACGAGG CCATCGCCAG CCTCGGCTGA
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| Protein sequence | MTDSTIIYTH TDEAPALATY SFLPVVQAYA ATAGVSVDSR DISLAGRIIA SFPEDLEEAQ
RIEDALAELG ELARTPEANI IKLPNISASI PQLKAAIVEL QKRGYALPDY PDDPKTDEER
EIRARYDKVK GSAVNPVLRE GNSDRRAPAS VKNYARTHPH RMGAWTPDSK TNVATMGAGD
FRSTEKSTII AAAGTLRIEL AGDDGSTTVL LPSLPVLAGE VVDAAVLRVA ALREFLTAQI
ARAKAEGVLF SVHLKATMMK VSDPIIFGHV VRAFFPKTFA THGATLAAAG LSPNDGLGGI
LKGLESLPEG AQIKASFAAE LAEGPALAMV DSDRGITNLH VPSDVIVDAS MPAMIRTSGH
MWGPDGREAD TLAVLPDSSY AGIYQVAIDD CRAHGAYDPA TMGSVANVGL MAQKAEEYGS
HDKTFEIPTT GTVRIVDQAG TVVLEQAVAA GDIFRACQTK DAPIRDWVKL AVARARATGD
PAVFWLDENR AHDARLIEKV RAYLPGHDTS GLRIEIKAPV DAIAFSLERI RRGENTISVT
GNVLRDYLTD LFPILELGTS AKMLSIVPLM NGGGLFETGA GGSAPKHVQQ LLRENYLRWD
SLGEFLALAA SFEQFARTTG NARAQVLADT LDRATATFLN EDKSPSRRLG GLDNRGSHFY
LALYWAQELA AQIGDPRLAE AFAGLAKTLA DQEKAIVDEL IAVQGSPADI GGYYQPDPVK
AAAVMRPSKI FNEAIASLG
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