Gene Francci3_2171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2171 
Symbol 
ID3906771 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2543475 
End bp2544482 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content75% 
IMG OID637879504 
Productheat shock protein DnaJ-like 
Protein accessionYP_481270 
Protein GI86740870 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.239332 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.641891 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCCAGG ACTACTACCA GCTTCTCGGT GTCGGCCGGG GCGCGAGCGC CGAGGAGATC 
CAGCAGGCCT ACCGCCGCCT CGCCCGCCGT TACCACCCCG ACGTCAACCG CGGCCCGGAG
GCGGAGGAGC GGTTCAAGGA GATCGGTGAG GCGTACCGCG TGCTGTCCGA CCCGAAGACG
CGGGCGCGCT ACGACCGGTT CGGCGCGGAC TTCCGGCGCA TCCCCGAGGA CTACGACGGA
CGGGTGACCG CCGGGCCGGA CTTCGGCCAG GCCGGCCGGG GCTGGAGCCG CACCGGCCGG
GTCCGGGCCG AACCGAGCTT CGGCGGCGCC GACTTCGCCG ATGGCACCGA CTTCGCAGAC
TTCGCCGACA GGGGTTTCGG ACGCGCCGGC CCCGGTGGCG CGGGCCTCGG CGGGAGCATC
TTCGGTGACC TGTTCGGTGA TCTGTTCGGG GCCCACGGCG CGACCGGGCC GATCCCCGGC
GCCGACCAGG AAGCCGAGCT CGAGCTGACC GTCGAGGAGG CCTACCGGGG CGGGCGGCGT
CAGATCACCC TCGCCGGCCC CGGCGGGAGC CCACGCAGCT ACCAGGTCAC CATCCCGCGG
GGGGTGGTCG AAGGCCAGCG CGTCCGGCTG GCCGGCCAAG GCGGCCGCGG CAGCAGGCAC
GGCCAGCCCG GCGACCTCTA CCTACACGTG AAGATCGCGC CGCATCCGTA TTACCGGCTG
TCCGGACGAG ACATCAACGT CCCGCTGCCG GTCACCCCCT GGGAGGCCGC CCTGGGCGCC
CGGGTCCCGG TCACCACCCC CGGCGGCGAG ATCAAGGTGC GCGTCCCGGC AGGATCGTCC
AGCGGCCGGC GGCTGCGCCT ACGCGGCGCC GGCCTACCCA ACCCCACCGG CCCGCCCGGC
GACCTGCACG CCGAGGTGCG CGTGGCGGTG CCGCCGGCCC TGACCGCCCG GGAACGCGCG
CTGTTCGAGC AGCTGGCCGC CGTCTCGGCC TTCGACCCGA GAACGTGA
 
Protein sequence
MAQDYYQLLG VGRGASAEEI QQAYRRLARR YHPDVNRGPE AEERFKEIGE AYRVLSDPKT 
RARYDRFGAD FRRIPEDYDG RVTAGPDFGQ AGRGWSRTGR VRAEPSFGGA DFADGTDFAD
FADRGFGRAG PGGAGLGGSI FGDLFGDLFG AHGATGPIPG ADQEAELELT VEEAYRGGRR
QITLAGPGGS PRSYQVTIPR GVVEGQRVRL AGQGGRGSRH GQPGDLYLHV KIAPHPYYRL
SGRDINVPLP VTPWEAALGA RVPVTTPGGE IKVRVPAGSS SGRRLRLRGA GLPNPTGPPG
DLHAEVRVAV PPALTARERA LFEQLAAVSA FDPRT