Gene Francci3_2138 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2138 
Symbol 
ID3905528 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2506792 
End bp2507259 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content73% 
IMG OID637879473 
Productputative serine/threonine kinase anti-sigma factor 
Protein accessionYP_481239 
Protein GI86740839 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0220396 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGGTA AACCGGAGCT GCCCGGCGAG TCGGGCGAGT CGGGCGAGCC CGGCGAGCCC 
GGCGAGCCCG GCGAGCCGTT GGACAGGTTC GTGCTGCCGC TCAGCCCGAT CGCGCCCCGG
CAGGCCCGGG TCCGGCTGGC CGCGGGCCTC GCCGGCACCG GCTTCGCGGC GGAGCTGACC
GAGATCGTCG TGCTGCTCGC CAGCGAACTG GTCACCAACG CCGTCGTGCA CGGCCGCGGT
GAGCCGGTTC TGGAGATCCG GACAACCGAC CACCAGGTGT GGGTCGGCGT CCAGGATCCG
GACAGCCGCC TCCCGCAGGT GCAGCAGGTC GACACCGACT CGCTCGGCGG GCGGGGTATG
CACCTGGTGG CCGAGCTCGC TGAGACCTGG GGCGCCGACG TCATCCCCGG CGACGGGAAG
GTCGTCTGGT TCCGGTTGCG TCGGGAGAGC CCCGCCGTCG ATGGTTGA
 
Protein sequence
MTGKPELPGE SGESGEPGEP GEPGEPLDRF VLPLSPIAPR QARVRLAAGL AGTGFAAELT 
EIVVLLASEL VTNAVVHGRG EPVLEIRTTD HQVWVGVQDP DSRLPQVQQV DTDSLGGRGM
HLVAELAETW GADVIPGDGK VVWFRLRRES PAVDG