Gene Francci3_2128 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2128 
Symbol 
ID3905518 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2498395 
End bp2498949 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content65% 
IMG OID637879463 
Producthypothetical protein 
Protein accessionYP_481229 
Protein GI86740829 
COG category[S] Function unknown 
COG ID[COG4636] Uncharacterized protein conserved in cyanobacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.578066 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGCTC CTGCCTGGAT GCACCAGCAG ATCACGGCGG AGGAATACGA CTCCTGGTCC 
GAGGAGCGGT GCGCGGGCAT CGAGATCGTG GACGGGACGG TCGTTGTGAG CCCCAGCGCG
TCCAAGCGTC ACAACCGGCT GGTCAAGATC CTCGCGGTCG CGTTGGAGGC TGCTGCCGGG
CCGGGCTGGA ACGCGGACTT CGACGTCGAT GTTCGGCTTC AGGACGTGCC GTTGACGAAT
CGGCGTCCGG ACGTGGCCGT GTACCGCGCC GACACGATCG ACATCATGTC GGCCCGTCCC
GAGCATCTTC TGCTCGTCGT CGAGGTGGTC TCACCGGGCT CTGAGACGAC CGACCGGATT
GTCAAGGCCG AGCAGTATGC GAAGGCTGGA ATCTCGTATT ACTGGCGGGT CGAGCAGCCC
CCCGCCGGCG TCCCGGTCGT CTATACCTAC GTCCTCGACC CGGCGACCGG AACGTACCGT
GGCGCTGAGG TCTTCACGGG CGCCGTCGAT GCTGCCGCAC CTTTCCCGGT CAAGATCGAT
CTCGGTCGGT TGTAG
 
Protein sequence
MIAPAWMHQQ ITAEEYDSWS EERCAGIEIV DGTVVVSPSA SKRHNRLVKI LAVALEAAAG 
PGWNADFDVD VRLQDVPLTN RRPDVAVYRA DTIDIMSARP EHLLLVVEVV SPGSETTDRI
VKAEQYAKAG ISYYWRVEQP PAGVPVVYTY VLDPATGTYR GAEVFTGAVD AAAPFPVKID
LGRL