Gene Francci3_1992 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1992 
Symbol 
ID3903700 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2341967 
End bp2342812 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content67% 
IMG OID637879328 
Product2OG-Fe(II) oxygenase 
Protein accessionYP_481095 
Protein GI86740695 
COG category[R] General function prediction only 
COG ID[COG3491] Isopenicillin N synthase and related dioxygenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTCATGA CCAGCACCAC CCCGACCCAC AGCACGACCG AGCACGACGC GGCGCTGCCG 
GTGCTCGACC TGCGCGAGTT CGACCCTGGC ACTGATCCCG CGGTGCGCAG CCGGTTCCTT
GAGCGACTGC GCGAGACCTG CCATGACGTG GGTTTCTTCT ACCTGGTGGG GCACGGCATC
GGTGACACCC TGTTCCGGGA GGTCGAGGAG GTCACCCGAG CGTTCTTCGC TCTGCCCGAA
GCCGATCGAA TGGCGATCGC GATGACCCGG TCGCCACACT TCCGTGGCTA CACCCCACTG
GGTGGTGAAC TCACGAACGG TCGGGCCGAC CGGCGCGAGG AGATCGACCT CGGCGAGGCC
ACCATCAAAG CCATCCACTA CCCTCCGTCC GGACCTGGCT GCGATCATCA AGGCGTTGGC
ACCCACCGGG ACTTCGGGCT GCTCACCTTC GTCCTGCAAG ACGCCGTCGG TGGACTGCAG
GTGGAGCGCG ACGGATGCTT CTTCGACGTC CCGCATCTGC CCGGCGCCCT GGTCGTCAAT
CTCGGCGAAA TGCTGCAGCT CGCCACCCAC GGCTACCTCA AGGCCACCGT CCACCGCGTC
ATCAGCCCAC CCGCTGGCGT GCGGCGATTC TCGGTTATCT ACTTCTTCAA CCCGCGCCTG
GACGCCACCC TCACTCCCAT CGACCTGCCC GCCGAACTTG CCGCCCAGGC AACGGGCGGA
CACAGCGCTG ACCCGGACAA CCCCATCCTC GCTACCTACG GCGAGAACAT CCTCAAGGTG
CGGCTGCGTG CCCACGCCGA CGTCGCGCAA CTCCACCACG CAGATTTGCT CGCCGCCGAG
AGCTGA
 
Protein sequence
MVMTSTTPTH STTEHDAALP VLDLREFDPG TDPAVRSRFL ERLRETCHDV GFFYLVGHGI 
GDTLFREVEE VTRAFFALPE ADRMAIAMTR SPHFRGYTPL GGELTNGRAD RREEIDLGEA
TIKAIHYPPS GPGCDHQGVG THRDFGLLTF VLQDAVGGLQ VERDGCFFDV PHLPGALVVN
LGEMLQLATH GYLKATVHRV ISPPAGVRRF SVIYFFNPRL DATLTPIDLP AELAAQATGG
HSADPDNPIL ATYGENILKV RLRAHADVAQ LHHADLLAAE S