Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_1954 |
Symbol | |
ID | 3904316 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 2295483 |
End bp | 2296895 |
Gene Length | 1413 bp |
Protein Length | 470 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637879291 |
Product | hypothetical protein |
Protein accession | YP_481058 |
Protein GI | 86740658 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0082937 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCCCGC CCCGCAGCGA CACGATGCTC GCCCGACTAC TTCATGATCG GAACTGGAGT TGCGACGACT TCCGCCGTGT CTTCGACACC ACCGCCCGCA CACTCAGCCG GGAAAACAAC GATCTTCGGG TGCCGGGGCC ACTCAGCGAC CGGCAGGCGA AACGGTGGAT CGCCGGCCAG GTCGCCACCA GGCCCTATCC GGCGGCATGC CGGGTGTTGG AGGAGATGTT TCACGTTTCC GTGGAAGATT TGCTGACCCG GAATCCCACT CGCTACCGTG AGACACAGGC CGTAGCCCCG CCGCCCGTGC TACCACGTCC CGTCATGGTT CCCGCTCAGG CGGAGCCCGG CAGCGGGCCG CCCCGCGAGG AGGTGAGTCC GTCGCGCCGC CGTGACCTAC TCGGCACCGG CATCCTTCTT GCCGCCAGCA CCGCCACGAC TGGCGCCACC AGCCGCGCCG CGCAGATCTC CCGCGCCATC GCCGCGTCCA CCCCGGACCC CCTCAGTGTC GCCCAGCTCC ACCAGGGCAT CCAACGCCTC ACCCGGATCT ACTCCACGAC ACCGCACGCG GATCTACTCG GACCCGTCGA ACAGGCGTGG GACGATGCGG AAGCCCGGTT GGAAACCAGA GTCACCGGCA CCGACCGTCG CGACCTCGAA CTCCTCGCCG GCCAATACGC CTTCTACCGT GGTCGACTCG CCTTCGACAT GGGCGATGAC GACGGCGCGT TGACGTTCTT CGTCCTCGCC GCTCAACACG CCCAGGCAGC CGGTAACCCA CTACTTGCCG GATCGGTTGC CGCCATGCGC TCCGCCGTGG CCTTCTTCGC CCGCGAGTTC GAGACCGCTG CGGACATCGC CGCCCAGGCC CAGCCGCAGG CGCACCCCTA TATCGTCCCG CTCCTCGCCT GCGCACAGGC CCGCGCCTAC GCCATCACCA GCCGCGAAGA CGAAGCACTA ACCGCCTTGC GGACCATGAA TGATCATGTC TGGACCGGCA ACCGCCTGCC AGGACCTTCA CCGATTGACG AAGAGTCCAG CGAAGCTTTC AATGCGGTGG TACTCGGCTA TCTCGGCAAG GGTGACGAAG CCGAGCCACA CGCCCGCGCA TCGTTGGCGA TGCTCAGCGG AACCGGACGG TACGTCAGCA CCGCCGGCAC CCATCTCGCA CTCGCACGGG CCTTCATCCA CCGCACCCAC CCGGACCCCG AACAGGCAGC CACCGCAGCA AGCGACGCCC TCATGATCGT TGACGGCAAG GAAGTGACCA ACGGCCCGAC CTTCAACCGG GCCGCCGGTA TTTGGCGCAC CCTCGCCCGC AACGAGGAGT GGGCACGGCT CGAACCCGTC CGCGACCTGG GTGAACAGGT CTCATCTGAG CGCCGTGCGC TCCCAGCAGG CCCAACCATC TAG
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Protein sequence | MAPPRSDTML ARLLHDRNWS CDDFRRVFDT TARTLSRENN DLRVPGPLSD RQAKRWIAGQ VATRPYPAAC RVLEEMFHVS VEDLLTRNPT RYRETQAVAP PPVLPRPVMV PAQAEPGSGP PREEVSPSRR RDLLGTGILL AASTATTGAT SRAAQISRAI AASTPDPLSV AQLHQGIQRL TRIYSTTPHA DLLGPVEQAW DDAEARLETR VTGTDRRDLE LLAGQYAFYR GRLAFDMGDD DGALTFFVLA AQHAQAAGNP LLAGSVAAMR SAVAFFAREF ETAADIAAQA QPQAHPYIVP LLACAQARAY AITSREDEAL TALRTMNDHV WTGNRLPGPS PIDEESSEAF NAVVLGYLGK GDEAEPHARA SLAMLSGTGR YVSTAGTHLA LARAFIHRTH PDPEQAATAA SDALMIVDGK EVTNGPTFNR AAGIWRTLAR NEEWARLEPV RDLGEQVSSE RRALPAGPTI
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